Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0590 ATGGGATTGGGTGCTGATAATGGTAAGGTGGAGTCTTGGGATGTTAGCAAATCAAGGGGAAAGAAGAAGAAGAAAGATGATGGCGTTATGGAAGAGGAAGAAACTGGGTGTTGGTTTAGGCTGAGGTTCATTGGCAGTTGCGTTTCTTCGAGATCCAAGGTTGATAGCTCAGTCAGCAGCATCAGCACTCATTACGCTGAAAGTAAATCAACTAACGGTACAAGTAGAGATCAGCCAACAGCTCCAGTGGTTTCTTCTACAACCACAAGTAACGCAGAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAAGTTGCTTCCAGGCTGCGAAAGTTCTCATTTAATGATCTTAAGTTGGCAACAAGAAACTTCCGGCCCGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACAGTTGCTGTAAAAACCCTCAATCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAGTTTTCTTGGTGATCTAGTTCATCCAAACCTCGTTAAACTAATAGGATACTGTATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTCGAGGAAGCCTGGAGAACCACTTATTTAGGAGGTCCCTGCCGCTTCCATGGTCCATTAGAATAAAAATTGCACTCGGGGCTGCAAAGGGTCTGGCTTTTCTTCATGAGGAAGCTGAACGACCTGTAATATATAGGGATTTTAAAACTTCCAATATACTGTTGGATGCTGAGTACAATACCAAACTTTCGGATTTTGGACTTGCTAAAGATGGTCCAGAGGGTGATAAAACCCATGTATCAACCCGGGTGATGGGAACTTATGGTTATGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTTACTTGTAAACACTGAAGATTATCAACTCCATCTTCACACATATGTTCCCTTTTTCTCCCCAGAAATGTCATTTCTTGATTTCTTTTCTCTAGCCTTTGTTAATGCCATACCTGCCAAACACATTTAG 1086 0.4245 MGLGADNGKVESWDVSKSRGKKKKKDDGVMEEEETGCWFRLRFIGSCVSSRSKVDSSVSSISTHYAESKSTNGTSRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRIKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNTKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVLLVNTEDYQLHLHTYVPFFSPEMSFLDFFSLAFVNAIPAKHI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0590 361 FunFam Serine/threonine-protein kinase BIK1 93 211 - -
Lele56g0590 361 PANTHER OS01G0588500 PROTEIN-RELATED 89 320 - -
Lele56g0590 361 Pfam Protein tyrosine and serine/threonine kinase 130 319 IPR001245 GO:0004672|GO:0006468
Lele56g0590 361 Gene3D Transferase(Phosphotransferase) domain 1 212 320 - -
Lele56g0590 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lele56g0590 361 Gene3D Phosphorylase Kinase; domain 1 85 211 - -
Lele56g0590 361 MobiDBLite consensus disorder prediction 1 29 - -
Lele56g0590 361 SUPERFAMILY Protein kinase-like (PK-like) 112 319 IPR011009 -
Lele56g0590 361 MobiDBLite consensus disorder prediction 65 98 - -
Lele56g0590 361 MobiDBLite consensus disorder prediction 12 29 - -
Lele56g0590 361 ProSiteProfiles Protein kinase domain profile. 126 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0590 361 ProSitePatterns Protein kinases ATP-binding region signature. 132 164 IPR017441 GO:0005524
Lele56g0590 361 MobiDBLite consensus disorder prediction 65 101 - -
Lele56g0590 361 FunFam Os07g0541700 protein 212 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0590 Lele-ChrLele56 4344681 4349191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0590 95 319 Glycoside Hydrolase AT3G07070 57.391 1.48e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele56g0590 PK_Tyr_Ser-Thr 3e-36 CL0016