Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0587 ATGGCCACGTCTGGTCCTAATAAGCTTTTTCCTCCCACAAATCTCACTGCTTTTCTTCAACACGAAAGCCTTCCTTCTTCTTCTCCTTCTTCTCATGTTTTTGACTCCTTCTTGCTTCACCACTCTGCCCCCTCCTTTCAAGGTTCAAAACCTCTGGTTGATTTCGAGAATGTTAGTGGAAGCAGAGTCACAGAATTGCCATTCTTCCAACAAGGTCTAGGGAAAGAAGACAACACTGAAGAGGAATACGATGCGTGCTTTCATCAACCAACAGGAAAAAAGAGGAGGCTCACAGACCAGCAAGTCCAGTTCCTTGAGAAGAACTTCGAGTTAGAAAACAAGCTCGAACCAGAAAGAAAAAATAAACTCGCTAAAGAACTCGGACTGCGACCAAGGCAAGTCGCTATTTGGTTCCAGAACCGAAGAGCCCGGTTCAAAACCAAACAGCTCGAAAAAGACTACACCACCTTAAAATCTAGCTACAAAAAACTCAAAAGTGACTATGACAATCTTCTTCACCAGAATGACAAGTTAAAAGAAGAGGTGAATTCTCTGAAGAACAAGTTGATAGGGAGAGATCATGAAGAGAAAGAAGAGGATTATGACAAGTGTGCTGATGTTTTGATCTCAAACAATAATAATGGGGTTTCTGAAAATCGGTCAAAAGTTGAAAAGGTTCCTAGAGTAATATGCAAACAAGAAGATGCCAATTCTGCTAAAAGTGATGTGTTTGATTCAGATAGCCCACACCACACTGCAGATTCGTCCCATGCCGAATTCGAAACAGAGCACTCAGATTTCTCACAGGACGAGGAAGACAACCTCAGGCATCATCATCATCATAACCTCTTGAGGGATCTCCCAAGTTTATTACCAAAGGTTGAAGAAGAGCCCTGTAACTTTGGATTCCCATTTGATCAAGATCAAGCCTTCTGTTTTTGGTCTTATTAA 951 0.4175 MATSGPNKLFPPTNLTAFLQHESLPSSSPSSHVFDSFLLHHSAPSFQGSKPLVDFENVSGSRVTELPFFQQGLGKEDNTEEEYDACFHQPTGKKRRLTDQQVQFLEKNFELENKLEPERKNKLAKELGLRPRQVAIWFQNRRARFKTKQLEKDYTTLKSSYKKLKSDYDNLLHQNDKLKEEVNSLKNKLIGRDHEEKEEDYDKCADVLISNNNNGVSENRSKVEKVPRVICKQEDANSAKSDVFDSDSPHHTADSSHAEFETEHSDFSQDEEDNLRHHHHHNLLRDLPSLLPKVEEEPCNFGFPFDQDQAFCFWSY 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0587 316 MobiDBLite consensus disorder prediction 240 273 - -
Lele56g0587 316 Gene3D - 87 155 - -
Lele56g0587 316 ProSiteProfiles 'Homeobox' domain profile. 88 148 IPR001356 GO:0003677
Lele56g0587 316 Pfam Homeodomain 93 146 IPR001356 GO:0003677
Lele56g0587 316 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 73 249 IPR045224 GO:0003700
Lele56g0587 316 FunFam homeobox-leucine zipper protein ATHB-6-like 96 142 - -
Lele56g0587 316 Coils Coil 147 188 - -
Lele56g0587 316 SUPERFAMILY Homeodomain-like 85 150 IPR009057 -
Lele56g0587 316 ProSitePatterns 'Homeobox' domain signature. 123 146 IPR017970 GO:0000981|GO:0006355
Lele56g0587 316 PRINTS Lambda-repressor HTH signature 128 144 IPR000047 GO:0003677
Lele56g0587 316 PRINTS Lambda-repressor HTH signature 119 128 IPR000047 GO:0003677
Lele56g0587 316 SMART HOX_1 91 152 IPR001356 GO:0003677
Lele56g0587 316 CDD homeodomain 93 149 IPR001356 GO:0003677
Lele56g0587 316 Pfam Homeobox associated leucine zipper 148 189 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0587 Lele-ChrLele56 4295298 4296512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0587 30 250 Homeobox Transcription Factor Family AT3G01470 42.601 1.46e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele56g0587 Homeodomain 1.6e-15 CL0123