Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele56g0566 | ATGTCGAACGGAGAGGAAGTTGTGAAGCTTCTGGGCGCATGGCCGAGCCCCTTTGTGATGAGGGCTCGCATCGCTCTCAATATTAAGTCTGTGAGTTATGAGTTCCTTCAAGAGACCTTGGGATCCAAGAGCCAGCTTCTGCTCCAGTCCAATCCTGTTCATAAGAAAATCCCAGTTCTCATTCATGGAGATAAGCCTGTTTGTGAGTCTCTCATTATTGTTGAGTACGTCGACGAAGTCTGGTCCTCTGGCCCTTCTATTCTTCCTTCTGATCCTTACGACCGTGCCGTTGCTCGTTTCTGGGCTGCCTATCTTGACGACAAGTGGTTCCCTGCAATGAAATCCGTGGGGGATGGTGCAAAAGGAGACGAAGAGAGGAAGGCTCTGATACAGCAATTAGAAGAAGGATTAGCGTTAATGGAGAGTGCTTATCACAGCATTAGCAAAGGCAAGCCCTTCTTTGGTGGAGACCAGGTCGGGTATCTGGATATTGCGTTCGGGTGCTTCCTCGGGTGGCTGCGCCTCACCCAGTCGTTTTCTGGGATCACGTTGTTGGACCACACCAAGACACCGGGACTGGCCCAATGGGCTGAAACATTCTGTGCTGACGATGCAGTTAAGCATGTCATGCCTGAAACTGACAAGCTTCGCGAGTTCGCTATGTCACTTAGGGCAAAAATGGCATCAAAAACTAGTTGA | 699 | 0.4993 | MSNGEEVVKLLGAWPSPFVMRARIALNIKSVSYEFLQETLGSKSQLLLQSNPVHKKIPVLIHGDKPVCESLIIVEYVDEVWSSGPSILPSDPYDRAVARFWAAYLDDKWFPAMKSVGDGAKGDEERKALIQQLEEGLALMESAYHSISKGKPFFGGDQVGYLDIAFGCFLGWLRLTQSFSGITLLDHTKTPGLAQWAETFCADDAVKHVMPETDKLREFAMSLRAKMASKTS | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele56g0566 | 232 | CDD | GST_N_Tau | 8 | 81 | - | - | |
| Lele56g0566 | 232 | SUPERFAMILY | GST C-terminal domain-like | 79 | 226 | IPR036282 | - | |
| Lele56g0566 | 232 | Gene3D | - | 88 | 231 | - | - | |
| Lele56g0566 | 232 | Pfam | Glutathione S-transferase, C-terminal domain | 100 | 203 | IPR004046 | - | |
| Lele56g0566 | 232 | Pfam | Glutathione S-transferase, N-terminal domain | 7 | 79 | IPR004045 | - | |
| Lele56g0566 | 232 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 223 | IPR010987 | - | |
| Lele56g0566 | 232 | SFLD | Main (cytGST) | 5 | 230 | - | - | |
| Lele56g0566 | 232 | CDD | GST_C_Tau | 92 | 221 | IPR045074 | GO:0004364|GO:0006749 | |
| Lele56g0566 | 232 | FunFam | Glutathione S-transferase GSTU6 | 3 | 88 | - | - | |
| Lele56g0566 | 232 | FunFam | Glutathione S-transferase U9 | 88 | 230 | - | - | |
| Lele56g0566 | 232 | SUPERFAMILY | Thioredoxin-like | 8 | 110 | IPR036249 | - | |
| Lele56g0566 | 232 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 10 | 216 | IPR045073 | - | |
| Lele56g0566 | 232 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 6 | 85 | IPR004045 | - | |
| Lele56g0566 | 232 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
| Lele56g0566 | 232 | SFLD | Main.3: Omega- and Tau-like | 5 | 230 | IPR045073 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele56g0566 | Lele-ChrLele56 | 4159919 | 4161455 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele56g0566 | 8 | 226 | Glutathione S-transferase Gene Family | AT1G10370 | 68.182 | 9.23e-108 | 308 |