Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0559 ATGGATCGAAATACCAACGCCAGCGTTCAAATACCTTCGTCTCGCACCGGAGTGGAGCCTCAGGCACCGGACAAGCGCACCATTTCCTGCAACGATCGCAAGGCTAACTTTCCCTGTGCATTCACGGGAAACTCGATATCAACTACAAAATATAACATCCTCACTTTCTTGCCAAAAGGGCTATTTGAACAGTTCAGGCGGGTTGCTAATCTCTATTTTCTTGGGATATCAATTTTAGCAGCAACACCAATCAGTCCTATATCTCCAATAACTAATGTGGTTCCTCTGTCTCTGGTGCTTCTTATCTCTCTCATTAAGGAAGCTTTTGAGGACTGGAAACGTCTTCAAAATGACAAGGTCATAAACAATAGAATGATAGATATTTTGCAAGATCAAACATGGGAGTCCATAGCCTGGAAAGATCTGCAGGTTGGAGACATTGTCAGGGTTAAGCAGGATGGGTTTTTTCCAGCAGATCTGCTTTTCCTGGCCAGTACAAATGCAGATGGTGTCTGCTATATTGAGACTGCAAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCATTGGAGAAGACTTGGGATTACAGGACTCCAGAGGATGCATCTGAGTTTCAAGGTGAAATTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATCTTATTATTCAAACACAAACACTACCTCTCAGTCCAAACCAAATGTTGCTGCGAGGCTGCAGTCTGAAAAATACCGGGTATATTGTTGGAGTAGTTATTTTTACAGGGCATGAAACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTACATTGGAGAGGAAGCTTGACAAACTCATACTCGCTCTATTTGCAACTCTCTTCGGACTTTGTGTTGTTGGAGCCATAGGCAGTGGCATCTTTGTAAACAACAAATATTTCTATTTACGCCTTGATGTAGGTGGTGAGGGCTCAGCACAGTTCAACCCAAATAACAGATTTATGGTTATTGTGCTGACTTTATTTACCCTCATAACTCTATATTCACCGCTCATCCCTATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTCTACTCAATTTATCAACAAGGACTTGTGCATGTACCATAAGGAAACCAATACCCCAGCATTGGCCAGGACATCTAATCTGAATGAAGAACTTGGGCAGGTGGAATACATATTCTCTGACAAAACAGGAACTTTAACAAGAAACTTAATGGAGTTTTTTAAGTGTTCAATTGGAGAACAGGTCTATGGAACTGGTGTTACTGAAATTGAGAGGCAAATAGCAGAGCGTAATGGGATGAAAGTTGAGGAAAATAAATCAGGCACTGCAGTGCAAGAGAGGGGCTTTAATTTTGATGATGATAGACTTATGCAAGGAGCTTGGAGGAATGAGCCTAATCCTAACACTTGTAAGGAATTCTTCAGATGCCTTGCTATATGCCATACCGTTCTTCCCGAGGGCGATGAGTCCCCGGAAAAAATCACGTATCAAGCAGCCTCACCTGATGAGGCTGCTTTGGTCATTGCCGCAAAGTGCTTTGGTTTCTTCTTTTACAGACGAACACCAACAACGATATATGTTCGCGAATCACATGTTGAACAGAAGGGTAAAATCCAAGATGTGCCTTATGAAATTTTGAATGTGCTTGAATTTAACAGTACAAGGAAGCGCCAGTCTGTTATATGCCGTTATCCAGATGGGAAGCTTGTATTATACTGTAAGGGTGCTGATACAGTAATCTACGACAGACTCGCCGATGGCGGTGATGATATAAAGAAATTGACCAGGGAGTATTTGGAACAATTTGGAGCTGCTGGGTTACGTACATTATGCCTGGCCTACAAAGAATTACATACTCAAGTATATGAAAGTTGGAATGAGAAGTTCATCCAGGCCAAGTCCTCTCTAACTGATCGTGACAAGAAGCTGGATGAGGTGGCAGAACTTATAGAAACTGATCTGATTTTGATTGGTAGCACTGCCATCGAGGACAAGCTTCAAGAGGGAGTTCCATCATGTATAGAGACTCTCCAAAGAGCTGGCATTAAAATTTGGGTGCTTACTGGAGACAAGATTGAAACAGCAATAAATATAGCCTATGCATGCAATTTGATATCCAATGATATGAAAAAGTTTATTATCAGCTCAGAAACTGAAGCAATTAGAGAAGTTGAAGAAAGGGGTGACCCGGTTGAGATCACGCATTTTATTAGAGAAGAAGTGAAGAAAGAGTTGAAGAAATCCCTTGAGGAAGCACAGAGCTATCTTCTCTCTCTAAATGGACAAAAATTAGCACTTGTAATTGATGGGAAAAGTCTAACTCATGCATTAGACCCAAGCTTAAGAGTGATGCTTCTGAATTTGGGTTTGAATTGTCATGCGGTTGTTTGCTGTCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGGCTAGTCAAGAAAGGTGCACATAAAATAACATTAAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCACGTTGGTGTTGGCATAAGTGGGATGGAGGGGATGCAAGCAGTGATGGCTAGTGATTTTGCCATCGCGCAGTTTCGGTTCCTTTCTGATTTACTACTTGTCCATGGCCGGTGGTCATACCTTCGAATATGCAAGGTTATTACATACTTCTTTTATAAGAATCTCACATTCACTCTTACTCAGTTTTGGTTTACCTTCCAAACGGGGTTTTCTGGACAGAGGTTCTATGATGATTGGTTTCAGTCATTATATAATGTGATCTTCACGGCACTGCCTGTGATTGTTGTTGGACTATTCGACAAGGATGTGAGCGCATCTCTTTCCAGGAAGTATCCTGGACTCTACATGGAGGGAATAAGGAATGTCTTCTTCAAATGGAGTGTTGTGGCAACATGGGCCTTTTTTTCAGTGTACCAGTCTTTGATATTGTTCTATTTTGTGATTTTGTCGAGTTCAGGTGCAAAAAATTCAGCAGGCAAGACATTTGGACACTGGGATGTCAGTACAATGGCATATACATGTGTTATTGTAACAGTCAATTTACGACTACTTATGATATGTAATTGGGTCACAAGATGGCACTTAATTGGCGTTGGTGGAAGTATATTAGCATGGTTTATTTTCGTCTTCATATATTCAGTGATCAGACTGGAGAATGTATATTTTGTGATATACGTCATAATGAGCACACTCTATTTCTACGTCACGCTTCTTCTTGTTCCCATTGCTGCCCTCTTGGGTGACTTTGTCTTCCAAGGGATTCAGAGATGGTTCTTCCCCTATGATTATCAAATTATTCAGGAAATTCACAGAGACGATCCGGATACCGGCAGCAGGACACAGCTGCTGGAAGTGGGGAGTCATTTGACGCCATCAGAGGCGAGGAGCTACGCCATGTCTCAACTGCCGCGTGAGGTATCAAGGCACACAGGCTTTGCTTTTGATTCGCCTGGCTACGAATCCTTTTTCGCTTCACAGTTTGGTGTGCGTGTCCCGCAAAAGGCATGGGATGTTGCTAGACGAGCTAGCAGGTTTCGAGCACCAAAGATAGGAGGCCACAAAAAATAG 3618 0.4179 MDRNTNASVQIPSSRTGVEPQAPDKRTISCNDRKANFPCAFTGNSISTTKYNILTFLPKGLFEQFRRVANLYFLGISILAATPISPISPITNVVPLSLVLLISLIKEAFEDWKRLQNDKVINNRMIDILQDQTWESIAWKDLQVGDIVRVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYRTPEDASEFQGEIQCEQPNNSLYTFTGNLIIQTQTLPLSPNQMLLRGCSLKNTGYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILALFATLFGLCVVGAIGSGIFVNNKYFYLRLDVGGEGSAQFNPNNRFMVIVLTLFTLITLYSPLIPISLYVSIEMIKFIQSTQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGEQVYGTGVTEIERQIAERNGMKVEENKSGTAVQERGFNFDDDRLMQGAWRNEPNPNTCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVIAAKCFGFFFYRRTPTTIYVRESHVEQKGKIQDVPYEILNVLEFNSTRKRQSVICRYPDGKLVLYCKGADTVIYDRLADGGDDIKKLTREYLEQFGAAGLRTLCLAYKELHTQVYESWNEKFIQAKSSLTDRDKKLDEVAELIETDLILIGSTAIEDKLQEGVPSCIETLQRAGIKIWVLTGDKIETAINIAYACNLISNDMKKFIISSETEAIREVEERGDPVEITHFIREEVKKELKKSLEEAQSYLLSLNGQKLALVIDGKSLTHALDPSLRVMLLNLGLNCHAVVCCRVSPLQKAQVTRLVKKGAHKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRFLSDLLLVHGRWSYLRICKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIVVGLFDKDVSASLSRKYPGLYMEGIRNVFFKWSVVATWAFFSVYQSLILFYFVILSSSGAKNSAGKTFGHWDVSTMAYTCVIVTVNLRLLMICNWVTRWHLIGVGGSILAWFIFVFIYSVIRLENVYFVIYVIMSTLYFYVTLLLVPIAALLGDFVFQGIQRWFFPYDYQIIQEIHRDDPDTGSRTQLLEVGSHLTPSEARSYAMSQLPREVSRHTGFAFDSPGYESFFASQFGVRVPQKAWDVARRASRFRAPKIGGHKK 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0559 1205 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 470 675 IPR023299 GO:0000166
Lele56g0559 1205 SUPERFAMILY Calcium ATPase, transmembrane domain M 42 1110 IPR023298 -
Lele56g0559 1205 Pfam Phospholipid-translocating ATPase N-terminal 28 92 IPR032631 -
Lele56g0559 1205 FunFam Phospholipid-transporting ATPase 102 271 - -
Lele56g0559 1205 MobiDBLite consensus disorder prediction 1 25 - -
Lele56g0559 1205 Gene3D - 667 877 IPR023214 -
Lele56g0559 1205 Gene3D - 532 655 IPR023299 GO:0000166
Lele56g0559 1205 Pfam E1-E2 ATPase 125 315 - -
Lele56g0559 1205 Coils Coil 756 776 - -
Lele56g0559 1205 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 24 1156 - -
Lele56g0559 1205 SUPERFAMILY HAD-like 394 880 IPR036412 -
Lele56g0559 1205 Gene3D - 106 270 - -
Lele56g0559 1205 PRINTS P-type cation-transporting ATPase superfamily signature 406 420 - -
Lele56g0559 1205 PRINTS P-type cation-transporting ATPase superfamily signature 837 856 - -
Lele56g0559 1205 CDD P-type_ATPase_APLT_Dnf-like 43 997 - -
Lele56g0559 1205 FunFam Phospholipid-transporting ATPase IC 403 415 - -
Lele56g0559 1205 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 810 916 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele56g0559 1205 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 41 1118 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele56g0559 1205 FunFam Phospholipid-transporting ATPase 670 877 - -
Lele56g0559 1205 Pfam Cation transport ATPase (P-type) 504 597 - -
Lele56g0559 1205 SFLD Haloacid Dehalogenase 388 888 - -
Lele56g0559 1205 FunFam Phospholipid-transporting ATPase 514 669 - -
Lele56g0559 1205 MobiDBLite consensus disorder prediction 1 17 - -
Lele56g0559 1205 ProSitePatterns E1-E2 ATPases phosphorylation site. 408 414 IPR018303 -
Lele56g0559 1205 SUPERFAMILY Calcium ATPase, transduction domain A 123 267 IPR008250 -
Lele56g0559 1205 SFLD p-type atpase 388 888 IPR044492 -
Lele56g0559 1205 Pfam Phospholipid-translocating P-type ATPase C-terminal 865 1110 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0559 Lele-ChrLele56 4116742 4127173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0559 4 1200 Primary Pumps ATPases AT1G59820 74.979 0.0 1912