Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0554 ATGAAGTTCATCTTTCTCACTGCTTCAATCTTTCTCCTTTATTCATCATCGCTTTGTGTTTCCATCGAGGACGACGTGGTTTGTCTTGAAGGTGTAAAGAACTCATTTTCCGACCCAAATGGAAAACTCAGCTCTTGGAGCTTCACCAACACTTCTGCTTCCTCAATCTGCCAGCTCGTCGGAGTTTCTTGCTGGAACGAGAAGGAGACCCGCCTCATCAGCCTCCAGCTCCGTGACATGCAGCTCGCTGGAAAACTCCCTGAGTCGCTCAAGTATTGCCGGAGCCTCCAGACCCTCGTACTCTCCGGTAACGCTCTCTCCGGTTCGATCCCTCCTTATATCTGTAGCTGGTTGCCTTATTTGGTGACCCTAGATCTCTCCGGTAACCAAATATCGGGTTCAATCCCACCCGAGATTGTGAATTGCAAGTTCCTGAATACCCTTATTCTGAACGATAACCAATTATCGGGTTCGATCCCTTACGAACTTGGTCGGCTTGACCGATTGAAGAGGCTCTCTGTTGCCAACAACGATCTTTCTGGTTCTATTCCACCGGATTTGTCCAAATTTGACGCAGCTGATTTTGACGGGAACAGCGGATTATGCGGGAAGCCTATTGGATCAAAGTGTGGTGGATTGAGTCGTAAAAGTCTTGGGATTATTATTGCTGCTGGTGCGATTGGAGCCTTGGGATCTTTAGCTGTGGGTTTCGCTCTCTGGTGGTGGTTCTTCCTGAGAATCAATGAGCAAAAGAAAGAGTATAATGGTTCTGGTGGTGGAAAGCCAGTGGGCGATTGGATTGATTTGTTAAAGTCACATAAGCTTGTTCAAGTTTCTTTGTTCCAGAAACCCATCGTGAAAGTCAGATTAGCTGATTTGCTAATCGCTACCAATAGCTTTCATCCCGAAAACATTGTGATTTCAAGTAGAACAGGAGTCTCTTATAAGACAGTTCTGCGTGATGGGTCTGCTCTTGCTGTGAAGAGGCTTAATTCTTGTAAACTCGGTGAGAAGCAATTTAGATCAGAGATGAACAGATTAGGGCAGCTCAGACACCCCAATTTGGTCCCTCTATTGGGTTTCTGTATGGTGGAAGAAGAGCAGCTTTTGGTGTACAAGCATATGTTCAATGGGACTTTGTATTCTCAGTTGCATAAAAAAGGTCATGCTAATAGTAGTCAATATAGTTTTCTGGATTGGTCAACGAGGCTGAGAATTGGGATTGGTGCTGCCAGGGGACTTGCTTGGCTTCACCATGCTTGTCAACCTCCCTATATTCACCAGAACATCAGCTCGAATATAGTCCTTCTTGACTATGATTTCGAAGCTCGGATAATGGATTTCGGATTGGCGAGTCTCTTGGTTACTCGTGATCCCAACGATAGCTCCTTTGTGAATGGTGATCTGGGTGAATTTGGTTATGTTGCTCCTGAGTACCCGAGCACCATGGTCCCTTCCCTGAAGGGAGATGTTTATGGTTTTGGAGTTGTTCTCTTGGAGTTGGTCACTGGGATGAAGCCAGTGGAAGTGAACACTGGAGGGGAAATAGGATTCAAAGGGAATTTAGTAGATTGGGTCAATTGGTTAACAGTGACAGGGAGAACTAAAGAAGCCATAGATAAAGCTTTGTTAAATGAAAATCCTGAACATGGTGATGAATTTATGCAGTTCATGAAGGTTGCCATATCTTGTGTTGTTTCTAGACCTAAAGATAGGCCTTCCATGTACCAGGTTTTCTCCTCTTTGAAGAGCATGGCTGAGAAACATGGTTTTGCAGACCAGTATGATGAATTCCCAGTTGTCTCTGGCAAAGACTCTGACTACAATAAGAATTAG 1836 0.4483 MKFIFLTASIFLLYSSSLCVSIEDDVVCLEGVKNSFSDPNGKLSSWSFTNTSASSICQLVGVSCWNEKETRLISLQLRDMQLAGKLPESLKYCRSLQTLVLSGNALSGSIPPYICSWLPYLVTLDLSGNQISGSIPPEIVNCKFLNTLILNDNQLSGSIPYELGRLDRLKRLSVANNDLSGSIPPDLSKFDAADFDGNSGLCGKPIGSKCGGLSRKSLGIIIAAGAIGALGSLAVGFALWWWFFLRINEQKKEYNGSGGGKPVGDWIDLLKSHKLVQVSLFQKPIVKVRLADLLIATNSFHPENIVISSRTGVSYKTVLRDGSALAVKRLNSCKLGEKQFRSEMNRLGQLRHPNLVPLLGFCMVEEEQLLVYKHMFNGTLYSQLHKKGHANSSQYSFLDWSTRLRIGIGAARGLAWLHHACQPPYIHQNISSNIVLLDYDFEARIMDFGLASLLVTRDPNDSSFVNGDLGEFGYVAPEYPSTMVPSLKGDVYGFGVVLLELVTGMKPVEVNTGGEIGFKGNLVDWVNWLTVTGRTKEAIDKALLNENPEHGDEFMQFMKVAISCVVSRPKDRPSMYQVFSSLKSMAEKHGFADQYDEFPVVSGKDSDYNKN 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0554 611 ProSiteProfiles Protein kinase domain profile. 300 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0554 611 Gene3D Ribonuclease Inhibitor 23 212 IPR032675 -
Lele56g0554 611 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 33 187 - -
Lele56g0554 611 Gene3D Phosphorylase Kinase; domain 1 263 374 - -
Lele56g0554 611 SUPERFAMILY Protein kinase-like (PK-like) 276 582 IPR011009 -
Lele56g0554 611 Pfam Protein tyrosine and serine/threonine kinase 323 581 IPR001245 GO:0004672|GO:0006468
Lele56g0554 611 SUPERFAMILY L domain-like 19 198 - -
Lele56g0554 611 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 22 211 - -
Lele56g0554 611 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Lele56g0554 611 Gene3D Transferase(Phosphotransferase) domain 1 375 603 - -
Lele56g0554 611 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0554 Lele-ChrLele56 4083777 4085612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0554 1 604 Receptor kinase-like Gene Family AT1G27190 65.842 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele56g0554 PK_Tyr_Ser-Thr 1.7e-28 CL0016