Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0552 ATGATGCCTCGCACGTGCTCACAGTGCGGTACTATCGGCCACAACTCCCGAACATGCGCCGACGGCAACAACTGCGCCGGTGAGAACACTATCTTACTCTTCGGGGTGCGAGTCACGCAAGGGAACTCGTTCAGGAAGAGCGCTAGCATGACCGATCTATCCCAGTACGAGCAGCCGCTGCCTCAGGATTCCAACGCCCATGCCGGTTACGCCTCCGATAATGTCGTTCACGCTTCCAGTCGTAGCCGCGAGCGGAAGAGAGGTGTTCCGTGGACGGAGGAGGAGCACAGGCTATTCCTGTTGGGGCTTCAACAGGTAGGGAAAGGTGATTGGAGAGGGATTTCTAGAAAATTCGTGAAAACGCGTACGTCAACTCAGGTAGCCAGTCACGCTCAGAAGTACTTCCTTCGCCGGCATAATCGTAACCGGAGACGCCGGAGATATAGTCTGTTTGATATCACCACTGACGCGGTGACAGAATCCTCAACGACAATGGAAGGGAGAGTCCACCAAGAGGCAGTACCACCCAGATATCCCCATTACGGTGGGTTTGGCGGTTCTGCTTTTCAGATGACGCTGTCACCGCCGATGACACCGATGGGAGCTAAGGTGATAAGGCCTACGCCGATTCTGCCAGTTGATCCATCGTCAAAAATGGCAAACCTACATTTGAATGAGGAAGGTCACGTGGTCGAGTCTCTGCCGGCGAGCAAGGAGAAGTCGTCGTTGGCTTTTGAGGTGATGCCAGGAAAGCTTAACGGCGGCGGTGATAGCAATAACATGATCAGTGTTGCTTGA 798 0.5414 MMPRTCSQCGTIGHNSRTCADGNNCAGENTILLFGVRVTQGNSFRKSASMTDLSQYEQPLPQDSNAHAGYASDNVVHASSRSRERKRGVPWTEEEHRLFLLGLQQVGKGDWRGISRKFVKTRTSTQVASHAQKYFLRRHNRNRRRRRYSLFDITTDAVTESSTTMEGRVHQEAVPPRYPHYGGFGGSAFQMTLSPPMTPMGAKVIRPTPILPVDPSSKMANLHLNEEGHVVESLPASKEKSSLAFEVMPGKLNGGGDSNNMISVA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0552 265 Gene3D - 91 140 - -
Lele56g0552 265 SUPERFAMILY Homeodomain-like 85 138 IPR009057 -
Lele56g0552 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Lele56g0552 265 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Lele56g0552 265 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 137 IPR006447 GO:0003677
Lele56g0552 265 SMART sant 87 137 IPR001005 -
Lele56g0552 265 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Lele56g0552 265 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
Lele56g0552 265 PANTHER TRANSCRIPTION FACTOR KUA1 3 223 - -
Lele56g0552 265 CDD SANT 90 135 IPR001005 -
Lele56g0552 265 FunFam transcription factor MYB1R1 89 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0552 Lele-ChrLele56 4075937 4076939 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele56g0552 Myb_DNA-binding 1.8e-10 CL0123