Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0514 ATGCACAGTGTGCTCTTAATACTAAGATACTCATTTACCCCAGCCCACTTGCTTACGCTTGCAAGCGACGCTAACTGTTTTGTGCTTTCCATGGCTTCCTCTGCATTTCTTACGGTTCCTCTCTGTCTCCTTTTCTGCATCGTCTCACTTCACGTTTCGGCGACGACAGTCCTTGAAGATGGCTATACGGTGGTTACCATCATCGACGGTCACAAGCTCAACATCAACCCTCATTCTGTGCTCCAGCTTCCCGGTTCGTCCGATCTTATCATTCTGGATCACGCCAACAGTGCTTTCTATACCATACAGTTTCCCACATCCCAAGATAGTGTTGTTAAAAAAATTTCTGGTTCTGGATTGGGATATTCAGACGGTGGTTTAGGTTCTGCTCAATTTAACAGACCCAGAAGCTTCGCTGCTGATTTGAATGGGAACGTGTATGTTGCTGATAGGACCAATCACGTTATCAGAAAAATTAGCCGATCTGGTGTAACAACAATTGCTGGGGGTTTCTCACTGAAGGAAGGTAGCACAGATGGGCCAGCACAAAATGCGACATTTTCTAATGATTTTGAGCTAGCATTCATTCCTAGCAGATGCATTTTACTGGTTTCTGATCATGGCAATCGATTAGTTCGCCAGATTAGTTTAAAGAAGGAAGACTGTACCCCTCCTCCATCAGGGCTTGGTGCTATTCCTGCTTGGACTCTGGGTCTGGGATTTGGACTCCTGTTTCTGGGTGCAATATATTTTGTTGCAGTCCGTCCTTGCATCAATTCTCGTCGAGGCTTGAGGGCCGTCCTGGTGGTCGGGACATGGAAGCGCTACCTAATCAATCTGGGGAAGATAGTAGTGACACCCTGCTTCGCCATCAAAAGCGAAACTGTTAGCAGTAATATCTCTTCATTAGTCAGCATCTTGAAGAAACTCTTGAGTTTGAGTGTCGCTCATCTTTTTCTTATGTTTAGAATAAACAGAGTGATTTCTTCTAAACCTTGCAATGAACAAAAGCCTCTGATAGATTTAGATTCCTACAGTTGTGAAGTAACACAGCCAAGCAAGTACGATGATCAATTGAGAGATTTGATTGGCGCAGAGCGCATTAGAGCTGGTAACGTCGACAAGGATGGTGACGTGGGCTTTGCAGAGGCAGTTTTGCTGCAAGAGTCGTCTGTGTGTAAATATGGTTTGGTGAAGAGATTATAA 1206 0.4469 MHSVLLILRYSFTPAHLLTLASDANCFVLSMASSAFLTVPLCLLFCIVSLHVSATTVLEDGYTVVTIIDGHKLNINPHSVLQLPGSSDLIILDHANSAFYTIQFPTSQDSVVKKISGSGLGYSDGGLGSAQFNRPRSFAADLNGNVYVADRTNHVIRKISRSGVTTIAGGFSLKEGSTDGPAQNATFSNDFELAFIPSRCILLVSDHGNRLVRQISLKKEDCTPPPSGLGAIPAWTLGLGFGLLFLGAIYFVAVRPCINSRRGLRAVLVVGTWKRYLINLGKIVVTPCFAIKSETVSSNISSLVSILKKLLSLSVAHLFLMFRINRVISSKPCNEQKPLIDLDSYSCEVTQPSKYDDQLRDLIGAERIRAGNVDKDGDVGFAEAVLLQESSVCKYGLVKRL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0514 401 PANTHER - 51 230 - -
Lele56g0514 401 Gene3D - 55 217 IPR011042 -
Lele56g0514 401 SUPERFAMILY NHL repeat 61 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0514 Lele-ChrLele56 3756412 3758970 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele56g0514 56 3756412 3758970 Lele49g1067 49 6891500 6903570 CCT
Lele56g0514 56 3756412 3758970 Lele50g1155 50 7756382 7775005 CCT
Lele56g0514 56 3756412 3758970 Lele51g1081 51 6986263 6998566 CCT
Lele53g0947 53 19081400 19084984 Lele56g0514 56 3756412 3758970 hybridization
Lele54g0927 54 15726146 15728792 Lele56g0514 56 3756412 3758970 hybridization