Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0479 ATGTCAACACTCAACGAGCTTAATCTTCAAGAACGGATATGTTACGTGCAATGTGGATTCTGCACCACCATGTTACTGGTCAGTGTTCCATGCAGAAGTTTATCAATGGAGGTGACTGTGAGGTGTGGGAACTGCACAAACCTCCTCTCTGTGAATATGATGAAAGCTTCTTTCGTCCCCTTTCAACTATTTCCTTCTCTCACTTGTCTTGATCAGCCCAAAGAACGTAGTCCAGAAGAAAATGCAACAGACAAGAGTACTTGTTCTGATAGTGGCGAAGATGATGCAATTAATGAACGACCAGGGAAAAGACAAAAAACACCATCGGCTTATAATCGCTTCATCAGAGAAGAGATCAGAAGGCTGAAGGCTGAGAACCCAGACATGGTCCACAAGGAAGCTTTCAGAACAGCTGCCAAGAATTGGGCCAATTTCCCTCAAGCTCAATCTAAAGGAGATGAAGAGAGCTGTAGCCACGTGGACCCTCATGAAGATGTTGAGGAGGTAAAATCATAG 516 0.4419 MSTLNELNLQERICYVQCGFCTTMLLVSVPCRSLSMEVTVRCGNCTNLLSVNMMKASFVPFQLFPSLTCLDQPKERSPEENATDKSTCSDSGEDDAINERPGKRQKTPSAYNRFIREEIRRLKAENPDMVHKEAFRTAAKNWANFPQAQSKGDEESCSHVDPHEDVEEVKS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0479 171 MobiDBLite consensus disorder prediction 73 102 - -
Lele56g0479 171 MobiDBLite consensus disorder prediction 154 171 - -
Lele56g0479 171 Pfam YABBY protein 9 149 IPR006780 GO:0007275
Lele56g0479 171 Gene3D High mobility group box domain 91 159 IPR036910 -
Lele56g0479 171 MobiDBLite consensus disorder prediction 145 171 - -
Lele56g0479 171 MobiDBLite consensus disorder prediction 72 112 - -
Lele56g0479 171 SUPERFAMILY HMG-box 98 148 IPR036910 -
Lele56g0479 171 PANTHER PROTEIN YABBY 6-RELATED 1 155 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0479 Lele-ChrLele56 3554454 3556406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0479 2 151 C2C2-YABBY Transcription Factor Family AT1G23420 53.933 1.33e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele56g0479 YABBY 1.8e-47 CL0114