Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0477 ATGCCGAGGCCTTGGACTGGTAAAGCGCCATTGAAGAGCTCGAAGAAGAAAATCCCTCTCTTTGATTCTTTCAATCCTCCCCCACCAGGAATGAAAGGAGTGAAGCATGTTGAAATGCCAGGGCCGTTTCCAGGTGTGACGTATCCACAGGAGGGGAAGACGAGGGAGGAGATACTTGGGGAGCCTTTGAAGAAGTGGGAAATAAGAATGCTTGTTAAACCCATGTTGGGTGAAAATCGCCAGGTTAATCTCAGAAGGGATGGATTAACACATAATATGTTGGAATTAATACATTCACATTGGAAGCGAGCTCGTGTTTGTAAAGTTCGTTGCAAAGGTGTCCCGACCGTAGATATGGATAACGTTTGCTATCATCTTGAGGAGAAAACTGGGGGTAAAATAATTCATCGAGTTGGTGGTGTAGTTTATCTTTTCCGTGGGAGAAATTACAACTATCGTACTCGTCCACAGTATCCATTGATGCTCTGGAAGCCAGCTGCTCCAGTTTACCCAAAACTTATCCAAGAAGTTCCGGAAGGATTAACAAAAGATGAAGCTGACGAATTCCCTAAAAATGGAGTCTACGTTTCCCTTGGCTTAGATGAATTGGTTCCTTGTGTGTTGTTGTCATTTGATGATGAACAGATACTAATGTGGAGGGGGAAAGATTGGAAATCAATGTATCCTCAAGCTCCTCCAGTTTTAAGCCTTCCTGAAGTTGGTATTGCAAAGAACTTGAACAATTCAGGTGAGACTGAGGATGATCAAAATAAGGATGATAGAAACATGATGCCGTCAAGCCCGAAAATGACATCGCTGTGGAAGCGAGCGATAGAGTCGAGCAAAGCACTGTTGTTGGATGAGATTATTGTTGATCCTGATGCTCTCTTGGAGAAGGTAGAGGAATTTGAGGTTGCTTCACAGGCCATTGAACACTCCTCGCCGGCACTCATATTTTCCAGTGAAGATGGTGATGCTGCTACTAAGGGCCCACTCGCAGACTTTGAAGAAGACAGCACACATCCTAGTGATGGTTTTGCTACTGACGACGATGACTCCGAAGATTATCTGTATGACAACAGTGATGAGGATGAATTCAATGCTGAGGAGGGTTCATCAGCCCTACCTGGATCATTACCTATTGATTTAATTGCTGGAGATGAAGATTTTAGGGAGAGCAGTTGGCCTGAAATGTGGACATTTACTTTGGTAACTGTATACTTTGGGGTTGGATCATGTTTGTCCATATTTGGATGTTTCATTTACCCAAACAGATTCGTCGATGACACGGGCAATCGTTCTTATCTAGATACAGAGCAAGGCATTTATGTGGCTCCTAGGCTTAGGGGGAGTGAAGATATGTCTAACCTACCAAAGAGTTCACATTCCCATCAAGAACCTCATGCTCCAAGAACAGCTGGTTTTTGGGGTTACATTTTTCAAATACTTTTTCAGACTTGTGCAGGTGCTGTCTTGCTCACTGACTTTGTGTTCTGGTTCATCATTTATCCATTTTTGACATCCAAAGATTACAGCCTGAACTTTTTGATTGTTTGTATGCACTCCATTAACGCTCTTTTCCTTCTCGGGGACACGGCATTGAATCGCTTGAGATTTCCGATGTTTCGGTTTGCATATTTTGTCCTGTATACGACAATATTCGTTGTTTTTCAGTGGATCATTCATGCTTGTGTTTCAATTTGGTGGCCTTATCCTTTCCTTGACTTATCATCCTCATATGCACCTCTATGGTACTTTGCTGTGGGGGTACTGCATATTCCATGCTATGGCGCCTTTGTTCTAATAATAAAGTTGAAGCTGGCATGGTTGTCAAGAGCATTTCCTGATTCCTGCCAGTTTGTACGGTAA 1869 0.4302 MPRPWTGKAPLKSSKKKIPLFDSFNPPPPGMKGVKHVEMPGPFPGVTYPQEGKTREEILGEPLKKWEIRMLVKPMLGENRQVNLRRDGLTHNMLELIHSHWKRARVCKVRCKGVPTVDMDNVCYHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKDEADEFPKNGVYVSLGLDELVPCVLLSFDDEQILMWRGKDWKSMYPQAPPVLSLPEVGIAKNLNNSGETEDDQNKDDRNMMPSSPKMTSLWKRAIESSKALLLDEIIVDPDALLEKVEEFEVASQAIEHSSPALIFSSEDGDAATKGPLADFEEDSTHPSDGFATDDDDSEDYLYDNSDEDEFNAEEGSSALPGSLPIDLIAGDEDFRESSWPEMWTFTLVTVYFGVGSCLSIFGCFIYPNRFVDDTGNRSYLDTEQGIYVAPRLRGSEDMSNLPKSSHSHQEPHAPRTAGFWGYIFQILFQTCAGAVLLTDFVFWFIIYPFLTSKDYSLNFLIVCMHSINALFLLGDTALNRLRFPMFRFAYFVLYTTIFVVFQWIIHACVSIWWPYPFLDLSSSYAPLWYFAVGVLHIPCYGAFVLIIKLKLAWLSRAFPDSCQFVR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0477 622 MobiDBLite consensus disorder prediction 245 271 - -
Lele56g0477 622 SMART CRS1_YhbY_2 63 146 IPR001890 GO:0003723
Lele56g0477 622 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 200 383 IPR044599 GO:0000373
Lele56g0477 622 MobiDBLite consensus disorder prediction 329 347 - -
Lele56g0477 622 SUPERFAMILY YhbY-like 62 155 IPR035920 -
Lele56g0477 622 MobiDBLite consensus disorder prediction 316 352 - -
Lele56g0477 622 FunFam CRS2-associated factor 1, chloroplastic 62 157 - -
Lele56g0477 622 Gene3D - 62 158 IPR035920 -
Lele56g0477 622 MobiDBLite consensus disorder prediction 1 27 - -
Lele56g0477 622 Pfam CRS1 / YhbY (CRM) domain 65 146 IPR001890 GO:0003723
Lele56g0477 622 ProSiteProfiles CRM domain profile. 61 157 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0477 Lele-ChrLele56 3537431 3545597 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0983 53 19313800 19317108 Lele56g0477 56 3537431 3545597 hybridization
Lele54g0960 54 15943020 15945807 Lele56g0477 56 3537431 3545597 hybridization