Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0473 ATGGAAACTACTGGTTCGGTTTTCTGGCTTCTGGGTTTGCTGCTTCTGGCGTTGATGGAGATTTCTTCTGCCGCGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTCGCTCTGATGGCCATAAAAAATGAATTACATGATCCCCACAATGTCCTGGAGAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACCCGGGATGGCTCCGTCTCTGCTTTAGGATTGCCTAGTCAGAACTTGTCTGGTAAGCTATCTCCTGGGATTGGAAATCTAACCAACTTGCAATCTGTGTTACTTCAGAACAATGCCATTTCTGGTTCAATTCCCGCTGATATAGGAAAGCTGGAAAAACTTCAGACACTTGATCTTTCCAATAATACATTTAGCGGAGAGATACCTAGTTCTCTGGGGAGCCTCAATAATCTGCATTATCTGCGGTTGAATAATAACAGCCTTTCAGGATCCTGCCCTCAGTCTCTTAGCAACATTGAAGGTCTAACCCTTGTGGATCTCTCTTATAACAATCTGAGTGGTTCGTTGCCAAGAGTATCAGCCAGAACATTCAAGATTTTGGGAAACTCTTTGATTTGTGGTCCAAATGCTAAGAATAACTGCTCTAATGTTCTGCCGGAGCCACTTTCCTTCCCGCCAGATTCTTTAAGAGGCCAATCAGCATCTGGGACAAGAAGTCATAATGTTGCAGTTGCTTTCGGAGCAAGTTTTGGGGCTGCTTTTGTCATCGTCATTATTGCTGTGTTTATTGTTTGGTTGCGTTATAGACACAACAAACAGATATTCTTTGATGTTAATGAGCAATGTGACCCAGAGGTGTGCCTTGGCCATTTGAGAAGGTATACATTCAAAGAACTTCGAGCTGCAACAGATCATTTCAATTCAAAGAACATTCTTGGACGGGGGGGCTTTGGAATCGTCTACAAAGGGCGTTTCAATGATGGCTCTGTGGTGGCAGTTAAAAGGTTGAAGGACTATAATGCTGGTGGTGGCGAGATCCAATTTCAAACGGAAGTTGAGACCATAAGTTTGGCTGTTCACCGGAATCTCTTGAGACTTTGTGGGTTTTGCAGTACCGAAAACGAAAGGCTCCTTGTCTATCCATATATGCCTAATGGCAGTGTAGCCTCTCGATTAAAAGATCATATTCATGGCGGACCAGCCTTAGATTGGGTAAGGAGGAAGAGAATAGCTTTGGGAACAGCAAGAGGGTTGGTTTACTTGCACGAGCAGTGTGACCCTAAAATCATTCACCGTGATGTCAAAGCAGCCAACATATTGTTGGATGAAGACTTTGAGGCAGTTGTGGGTGATTTTGGTCTGGCAAAGCTTCTGGATCACAGAGACACTCATGTAACTACTGCTGTGCGGGGCACTGTTGGTCACATTGCTCCTGAATATTTATCTACAGGCCAGTCATCAGAAAAGACTGATGTGTTTGGTTTTGGGATCTTACTGCTCGAGCTGATCACAGGTCATAAGGCTTTAGAGTTTGGACGAGCAGCAAACCAGAAAGGTGTAATGCTTGATTGGGTGAAGAAGCTCCATCAAGAAGGAAGATTGAATCAAATGGTTGACAAAGATCTGAAGGGAAAATTTGATGCAAATGAACTGGAGGAAATGGTTCAGGTTGCACTGTTATGTACACAATTTAATCCTCTGCACAGACCTAAGATGTCAGAAGTTTTGAAGATGTTGGAGGGAGATGGCTTGGCTGAGAGGTGGGAGGAAGCTTCACAGACGACAGAGACAAGGTTCAGGTCTTTTGAAAACCCTCCTCAAAGGTACTCAGATTTTATAGAAGAATCTTCACTCATACTTGAAGCTATGGAGCTTTCTGGCCCTAGGAATTCATCTGAGATAGTCAAAGATAAATGCTTTTCGGTTGAACAATACAGAAACACTGAGAATATAATAGCCTCACTGAAGAATTCCAGTTTTAGCTCTGAAATTCACAATGTGGGTAATTTCTCTCAGGGAAAGCATGAAGGAGATTCGATTGAGAATAGCAATAATAATGCGAGTTCGATTCATCCAAAGAAGAAGATTGGTTTATTTAAAGATTGTGATATCTTTGACGGAAAGTGGGTGAGAGATGGTTCAAAACCACTTTATCCAGAAGGCTCTTGTCCAAACATTGATAAATCCTTCTATTGTCATCTTCATGGGAGGCCAGATAGAGATTATATCAAGTGGAGATGGCAACCCAATGGCTGCGACATTTCAAGGTTGGACTTGATGGACAAGACAGCTAAGACGGGCTACAATGCTGCATCATTATCTTCCACACAGGCCATTGGTGGACCCATGAGAAAACATCTCGAGGAAGAGTATTATCAAGAAGGTAACCATGTCCACCCAAAGATGGAAGTTTTGGATGCATATAGAAAGGCTTTGACCACATGGGCTCGGTGGTTTGGCAGAAACATCGATGCCAATCGAACTCAGGTTTTCTTCCGAGGATACTCACAATCCCATTTCAGCGGTGGGCAATGGAATTCAGGAGGACAGTGTCACAGAGAGAGCGAGCCGGTATTCAACGAGACGTACTTGGAAGAATATCCGGTGAAAATGAGAGTAGTGGAGCAAGCTCTCCAGAAAATGAGGATTCCAGTGACTTATATGAACATAACAAGGCTTACAGATGATTACAGAAACGATGGGCATCCTTCAATATACAGAATGAAATATGAAACAGAAGCAGAATTGAAATCTGCTGAGGTGTCTCAAGATTGTAGCCATTGGTGCTTGCCTGGAGTTCCTGATACTTGGAATGAATTGCTTTATGCCTCTCTCTTGCAACATGGCAAAGACACGTGCAAAAGCTGA 2859 0.4306 METTGSVFWLLGLLLLALMEISSAALSPSGINYEVVALMAIKNELHDPHNVLESWDINSVDPCSWRMITCTRDGSVSALGLPSQNLSGKLSPGIGNLTNLQSVLLQNNAISGSIPADIGKLEKLQTLDLSNNTFSGEIPSSLGSLNNLHYLRLNNNSLSGSCPQSLSNIEGLTLVDLSYNNLSGSLPRVSARTFKILGNSLICGPNAKNNCSNVLPEPLSFPPDSLRGQSASGTRSHNVAVAFGASFGAAFVIVIIAVFIVWLRYRHNKQIFFDVNEQCDPEVCLGHLRRYTFKELRAATDHFNSKNILGRGGFGIVYKGRFNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKDHIHGGPALDWVRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDTHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALEFGRAANQKGVMLDWVKKLHQEGRLNQMVDKDLKGKFDANELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAERWEEASQTTETRFRSFENPPQRYSDFIEESSLILEAMELSGPRNSSEIVKDKCFSVEQYRNTENIIASLKNSSFSSEIHNVGNFSQGKHEGDSIENSNNNASSIHPKKKIGLFKDCDIFDGKWVRDGSKPLYPEGSCPNIDKSFYCHLHGRPDRDYIKWRWQPNGCDISRLDLMDKTAKTGYNAASLSSTQAIGGPMRKHLEEEYYQEGNHVHPKMEVLDAYRKALTTWARWFGRNIDANRTQVFFRGYSQSHFSGGQWNSGGQCHRESEPVFNETYLEEYPVKMRVVEQALQKMRIPVTYMNITRLTDDYRNDGHPSIYRMKYETEAELKSAEVSQDCSHWCLPGVPDTWNELLYASLLQHGKDTCKS 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0473 952 SUPERFAMILY L domain-like 32 194 - -
Lele56g0473 952 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 587 - -
Lele56g0473 952 Pfam PMR5 N terminal Domain 697 750 IPR025846 -
Lele56g0473 952 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Lele56g0473 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Lele56g0473 952 Gene3D Transferase(Phosphotransferase) domain 1 380 596 - -
Lele56g0473 952 ProSiteProfiles Protein kinase domain profile. 303 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0473 952 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 764 940 IPR026057 GO:0016740
Lele56g0473 952 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Lele56g0473 952 Pfam Protein kinase domain 304 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0473 952 FunFam Somatic embryogenesis receptor-like kinase 1 380 596 - -
Lele56g0473 952 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Lele56g0473 952 SMART serkin_6 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0473 952 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Lele56g0473 952 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Lele56g0473 952 SUPERFAMILY Protein kinase-like (PK-like) 287 584 IPR011009 -
Lele56g0473 952 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0473 Lele-ChrLele56 3502017 3509581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0473 67 626 Receptor kinase-like Gene Family AT1G60800 76.182 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele56g0473 Pkinase 6.6e-43 CL0016