Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0471 ATGCAACATGTAGATCCGAGGCAGGAAGGCGATTATCCGGCAGAGGAAGCATGCCGGCTACTTCGGATAGGATTGCTTTACGCACAAGCATCAGCCAATCTGCGACCATCAATTCTCACAATGATGTTTGAAACTTTCCTTGAATATGTTGTAGAGAAGAAAACAGAGGCCTTTAAACTGACTTTTGGCCGTCTGTTTCAGCTTGCAAACCCAGAAATCTGTGCCAAGAACATGAAGAAAGCAGTTCAATTAGTCTCTTTTCAATCCCTTGTTCTCTTTTCACTATTTATGCTACGAGAAACTGTAGTGGCAGATCCGAGAACAAAGACAGTGCAAATAATGTGTGGCAACCAAACAGAGCACAATATCACAAACTTTGTCTCAAATTTTGTTACAACCATGGATGATATCAGTGATCAGATGAGGAATCATGGGTATGGAACTGCAGTTTCAGGGACAGGTCCTGATACTAACTATGGTCTTGCTCAGTGCTACGGAGATCTTTCTTTACTTGACTGTGTTCTATGTTATGCCGAGGCACGCACGATTCTTCCTAAGTGCTTCCCCAGCAATAGTGGTCGCATATACCTTGATGGTTGCTTTATGAGGGCTGAGAATTACAGCTTCTTTGAGGAGTATGGAGGAGAAGAAGACAGGGTTGTGTGTGGAAACACGACCAGAAAAGGCTCGAGTTTTAGAGCAGCAGCGAAGCAGGCGGTTCTGAGTGCGGTTGAAGTTGCAACTAATAATAAAGGGTATGCAAGACAGAAGGTTGCGGTATCAGGGACAACAAATGAGTCAGCTCATGTTCTGGCTAATTGTTGGAGAAGTTTGAACATGAGTTCTTGTAAAGCTTGTCTTGAAGATGCTTCTTCTTCGATATTCGGATGTTTGCCCTCGTCAGAAGGAAGAGCTCTGAACACTGGCTGCTTCATGAGGTATTCAGACACAGATTTTTTCAACAAGGAACTGGAAAGTAAAAGTTCATCAGGTAATGTAATAGTGCTAGTGGTTGCAATTGTCAGTTCCGTGATCGTTTTCGTTGTTGCAATAGCCATTGGGGTTTATGTCTGGAAACAGAGATACATTCAAATGAAACGAAGAGGTTCGAATGATGTGGAGAAGTTAGCAAAGACCCTTCACCACAACAGCTTGAACTTCAAGTCTTTCCAAGAAGACAAAAGCCACATCAGCACAGCTATTGCAGGAACTTTAGGGTATATGGCTCCAGAGTACCTAGCTCATGATCAGACATGGAAGCATTTCCAGTCAGGGACAGCAGAACAACTATTTGATCCGAATCTAATAACATCAGAAGAAAACAACAATGGCAATGTTCAAGAAGAAATGTTAAGGGTGATGCATATAGGACTTCTATGCACTCAAGAGATGCCTTCATTGAGACCAACTATGGCAAAAGCATTAGATATGCTAACAAAGGAGGAGCAACTTCCTGCTCCCTCTAATCCACCCTTCATAGATGAAACCACAATGGAACTCCAAGATATATATGATGATCCACTCTATCCTCTCAATGCCGCAGATTCAATTGCTACTATGTCCCACAGTGACTTCTGTCCCAGGTGA 1587 0.4279 MQHVDPRQEGDYPAEEACRLLRIGLLYAQASANLRPSILTMMFETFLEYVVEKKTEAFKLTFGRLFQLANPEICAKNMKKAVQLVSFQSLVLFSLFMLRETVVADPRTKTVQIMCGNQTEHNITNFVSNFVTTMDDISDQMRNHGYGTAVSGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTILPKCFPSNSGRIYLDGCFMRAENYSFFEEYGGEEDRVVCGNTTRKGSSFRAAAKQAVLSAVEVATNNKGYARQKVAVSGTTNESAHVLANCWRSLNMSSCKACLEDASSSIFGCLPSSEGRALNTGCFMRYSDTDFFNKELESKSSSGNVIVLVVAIVSSVIVFVVAIAIGVYVWKQRYIQMKRRGSNDVEKLAKTLHHNSLNFKSFQEDKSHISTAIAGTLGYMAPEYLAHDQTWKHFQSGTAEQLFDPNLITSEENNNGNVQEEMLRVMHIGLLCTQEMPSLRPTMAKALDMLTKEEQLPAPSNPPFIDETTMELQDIYDDPLYPLNAADSIATMSHSDFCPR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0471 528 FunFam Cysteine-rich receptor-like protein kinase 2 108 209 - -
Lele56g0471 528 FunFam Cysteine-rich receptor-like protein kinase 3 218 319 - -
Lele56g0471 528 Gene3D - 219 319 IPR038408 -
Lele56g0471 528 Gene3D - 107 209 IPR038408 -
Lele56g0471 528 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 159 371 - -
Lele56g0471 528 Pfam Salt stress response/antifungal 115 207 IPR002902 -
Lele56g0471 528 Pfam Salt stress response/antifungal 225 316 IPR002902 -
Lele56g0471 528 ProSiteProfiles Gnk2-homologous domain profile. 214 319 IPR002902 -
Lele56g0471 528 ProSiteProfiles Gnk2-homologous domain profile. 108 209 IPR002902 -
Lele56g0471 528 Gene3D Transferase(Phosphotransferase) domain 1 413 489 - -
Lele56g0471 528 SUPERFAMILY Protein kinase-like (PK-like) 393 494 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0471 Lele-ChrLele56 3459267 3465824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0471 388 528 Receptor kinase-like Gene Family AT1G70520 47.222 3.63e-40 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0991 53 19399997 19403114 Lele56g0471 56 3459267 3465824 hybridization
Lele54g0970 54 16028231 16031380 Lele56g0471 56 3459267 3465824 hybridization