Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0435 ATGGAGCCAGAAAAGGGCACCGCCGGACGCGGGTCCGGACCCGAACCCGGAAACTTACGCTTTCTCAGCTTATGCACGTCGCTACTTCGTCTCCGTAACTTCTCCAGGTGCCGTGAGTTCGCTCTCAACATCCAAAGATCCGATCCAGACATCTCCGACACTGTCGATCGAATCCTCGCAATCACTGACGTTGTTCTCGCCGCCGAGAGGCGACTTCATGGCCACTTCGACTGGTACGCTATTCTCCAACTACGCCGTAATGACTCCGGGAACTACCAACTCATACGGGATCAATTTAAGAGGCTCGCGCGTCTCTTGAACCCAAACAGAAATGAGTTTGCATCCTCAGATGAAGCGTTCGTGCTCGTGCGCGACGCATGGCGCGTGCTTTCGGACCCGGAAAAGAAAGCAGAATATGAGCAAGCGATTGGCGATTGCGTACCCGAAGAACATTACAAACAGAGTAGTGGGAGCAAGCAAGAGGGGTTTGGCGTTTTACCCAGAAATGGGCGTAACGTGAATGTGGGTGAACAGAAAGCCACATTTTGGACTATGTGCCCTTATTGTTACTCTTTGCATGAGTATGAGAAGATATACGAAGATTGCCCTCTGCGGTGCCAGAAATGCAGGATGGTCTTTCAGGGGATATCGTTGACGCCTCCGACGGATGACATGTTAGTGACGGGGAAAGACCAATACTATTGCTGCTGCATGCATGTACCTTTGAGGTATCCACCGTCGCAACACTCAGAGGTGAAAGAAAACAAGTCCGGTATTGCAAAACCGTGGTGTATGGAAGGCTGGATTAAGAATGGAAAATCTTATGCTGATACTCCTGAGGACGATGACGTTGACGATTCATCAAAGAACTGCGGAATTGGAGTAGAGGAAAGGGTTTTGCGGGCTGAGCAAGCTGGGACCGGGGGATCGTATGGAGATTTGGGAAATGGGAAGCGGCGGATGAGGGTGAAAACTGTGGCTAGAAACACAAAGAAGATGACCGGGAACAGGATGAGAAACCAGGCACATATTTCACGGGATAATGATGCTGAATCGTTGGATTTGGATGCAGAAGATGGTGACTGA 1086 0.5037 MEPEKGTAGRGSGPEPGNLRFLSLCTSLLRLRNFSRCREFALNIQRSDPDISDTVDRILAITDVVLAAERRLHGHFDWYAILQLRRNDSGNYQLIRDQFKRLARLLNPNRNEFASSDEAFVLVRDAWRVLSDPEKKAEYEQAIGDCVPEEHYKQSSGSKQEGFGVLPRNGRNVNVGEQKATFWTMCPYCYSLHEYEKIYEDCPLRCQKCRMVFQGISLTPPTDDMLVTGKDQYYCCCMHVPLRYPPSQHSEVKENKSGIAKPWCMEGWIKNGKSYADTPEDDDVDDSSKNCGIGVEERVLRAEQAGTGGSYGDLGNGKRRMRVKTVARNTKKMTGNRMRNQAHISRDNDAESLDLDAEDGD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0435 361 ProSiteProfiles dnaJ domain profile. 77 143 IPR001623 -
Lele56g0435 361 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 19 341 - -
Lele56g0435 361 CDD DnaJ 77 132 IPR001623 -
Lele56g0435 361 Pfam DnaJ domain 77 140 IPR001623 -
Lele56g0435 361 MobiDBLite consensus disorder prediction 330 361 - -
Lele56g0435 361 SUPERFAMILY Chaperone J-domain 74 152 IPR036869 -
Lele56g0435 361 Gene3D DnaJ domain 75 182 IPR036869 -
Lele56g0435 361 SMART dnaj_3 76 135 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0435 Lele-ChrLele56 3237569 3238654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0435 20 244 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.681 4.19e-45 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1008 54 16264419 16268626 Lele56g0435 56 3237569 3238654 hybridization