Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0427 ATGTTGCATAGAGCAGCAAACAATGCGTATTCATGGTGGTGGGCCAGCCACATCAGAACAAAGCAATCCAAATGGATGGAGCAAAATCTTCAAGATATGGAGGAAAAAGTGCAGAATGTTCTGAAACTTATAGAAGAAGATGGGGATTCTTTTGCAAGAAGAGCAGAAATGTATTACAAAAAGAGGCCAGAGCTGATACACTTTGTGGAAGAATCGTACCGGGCTTACCGGGCTTTAGCTGAACGGTATGATCACATATCAACTGAGTTGCAGAATGCAAACACCACCATTGCTTCTGTCTGCCCAGACCAAGTCCCTTTCATGGAGGATGATGATGATGAAGCATCACCAAGATCACCAATGTCACCAAGAGGAGTCCCCAGAAAACTACCAGAAGGTTTCAAACCACCAAGCATCCCGAAGCCTCCAGTTAAATATTTTAATAAAAGCGCGAATTCAATAGCGCCGAAGAAATTGTTTTCCAAGAAGACATCATCTTCTGCAGAAGCTATTTCCAAAGCTCCTAAATCTGGACTGAGCAAAAAGGAGGCACTTGAAGAGGTTGACAAGCTTCAGAAACAGATTCTGGGATTACAAACTGTGAAAGAGTTTGTAAAGAGCACTTATGATAATGCCATTGCAACATACTGGGAAACTGAGGAGCAGATCAAGGAGTTACAAGAGAGAGTTTTCAGTTTACAAGAGGAAATTGGTGAAGTTACTGTTATTGATGACAATGAAGCTCGTCGTTTGATGGCAGAAGCAGCTCTTAAATCATGCCAAGAGACATTGTCACAGTTGCAAGAGAAGCAGGAAAAGGCAATTAAAGAAACCAGGATAGAGTCCAAGAAAATACAGGATATCAAGAAGAAGTTTGAGTTTCTCAAGGATGAGTTCCAGTATAATCCAACCAATCAGAATGAGCCAAGAACCAAAAGAGATGCAAAAGAAGTAGCAGAAACAAAGGACTTGGATGAAGAAGAAGAGAGAATGACTCAGCAGAGGCAGGATCTGCGGATTTTACAAGAGAAGATTAAAGAACACTTTGAAGCTGGGTCGCATTCATCTCTCAGTGTGGCAGAAATGGCAGAGAAGATTGATGAGCTTGTGAATAAAGTAGTAAGCTTAGAGACTGCAGTTTCATCCCAGACTGCTTTGGTGAAGAGACTGAGAACAGAAGCTGATGAACTTCAATCACAAATCCTAGGTTTGGAAAATGACAAGGCAAGTCTAATCAATGACAAGAACAGCTTGAACAGCCAGCTGAGAAAAATGGAAGAAAAGATGCATGGAGTGCAGGATCTAAACCAAATTGTTGAGAGCCAGCATATGAATCTCCAAACCCATTTCACCGAAGCACGCTGTAATCTTGATCATCTCGCAGAGAAAGTCCATAATTTTCAACAAGATGATACAGAGGGAGAAAGGAAATCATCAGTTGAAGCCGAAGCAAAGCATGAGGTTAAAGGAGAAGACGCACTGAATCAAGACAATATCTTATTAAAAGATGTAAACTTGGAGAAGAAGCATAAAGCCACTGATTCAGTAGAAGATGAAGAGAAGTCACGCACTGGTTGTGTAGAGGATGATGCAAAGTCAGAAAACAAGCTTGTGGTAACTGATTCATTCAAAGGTGATGTAAAATTGGATCGGGAGGTAAACAAAATGCCAAGCGAGACCAAAGAGCAGGAGGGAACTGTTAATCCTGAAAGTGGTGATGAAAGAACTAGAGATGCTTTGAGCGCTAATACTGAAAAAACGGCAGAAAGTTCTTCAGACAGCTTTGAAAACATGCAAGAGATTGATGCAAAGTCAGATCAGGAGATTAAGGCTTCAATAACAAATATAACAGAAGAGGCGAAATTGCCAAGCGAGTTGAAAGAGCAGAAGGGAACTGTTAATCTTGACAGTGGTGGTGAAAAAATAGCAGAAAGTTCTTCAGATAGCTTCAAAAACCAGCGAGAGATTGATGATAAACCAAAGTCATCGGATACACAGAATTCTCTGGAATTTGAAGCCCAAGAGCAGCCAAGAGCACAAGAAGATGAACCAAACTGGCAGAAATTATTTACGGATGGACTGCAGGATAAAGAGAGAGTGTTGCTAGCAGAGTACACTATTACTCTTAGGAATTTCAAAGATGTGAAGAAGAAGCTCACTGAACTGGAGAACAAAAATCAAGGCAGTGACTTTGATACATCTTTGCAGTTGAAGGAACTGAAGCGAGCTATTGCCTCGAAAGATGAAGAGATTAGATATCTGCGTCAGAAACTGGATCTCCTGCAGAAAAGCTTGGAGGGAAATGAGGAATTGATGAAGTTAAATTTACCAATGCCAGCAGAGAACATTGATGAAATGTTAAAAACTGAGGCCTCTGACGGTACGTCAGCCATTGAAGAGAAGTTCCGGATGAGCATTGATAAACTTCTAGAGGAGAACTTAGAATTCTGGTTAAAATTCAGTACAATTTTCACCGAGATACAAAAATTTGATACCACCATCAATGACCTAGTGACCGAAGCATCGAGACTCAGCGAAAAATTGAAGGCTTCAGAGGGCAGTACTAACTCAAAATATTCTCTAAAATCAGATGCACGACCAATGTACAAACACCTTGAAGAAATCCGGACGGAATTAACAGTCTGGTTGGGAAAAAGCGCACTGCTGAAAGAAGAACTGAAATGCAGGTTCTCATCCTTGTGTGACATCCAAGAAGAGATAACAGTGGCATTGAAGGCCAGTGCTGAAGATGACGAATTTAAGTTTACGAGCTTTCAAGCGGCCAAGTTCCAAGGTGAGATTTTGAACATGAAACAAGAGAACAACAGGGTTGCTGATGAGCTTCAAGCGGGAGTTGACCATGTAACGACTCTGCAACTTGAAGTTGACAAGGTGCTTGCGAAATTGAATGATCAGTTTGGGCTCTCAACCACAAATAGACCCCAAGCTTCCCATCCCAGAAGTGTCAATTCCCGGGTTCCTTTAAGGTCATTTATCTTTGGTGATCATCCAAAGAAACAAAAACCATCATTCTTTTCTATTGTGGCCCTTGGAATGCATAGGAAGTATCGTTCAAGACCAAAGACCCCCATGTAA 3096 0.4125 MLHRAANNAYSWWWASHIRTKQSKWMEQNLQDMEEKVQNVLKLIEEDGDSFARRAEMYYKKRPELIHFVEESYRAYRALAERYDHISTELQNANTTIASVCPDQVPFMEDDDDEASPRSPMSPRGVPRKLPEGFKPPSIPKPPVKYFNKSANSIAPKKLFSKKTSSSAEAISKAPKSGLSKKEALEEVDKLQKQILGLQTVKEFVKSTYDNAIATYWETEEQIKELQERVFSLQEEIGEVTVIDDNEARRLMAEAALKSCQETLSQLQEKQEKAIKETRIESKKIQDIKKKFEFLKDEFQYNPTNQNEPRTKRDAKEVAETKDLDEEEERMTQQRQDLRILQEKIKEHFEAGSHSSLSVAEMAEKIDELVNKVVSLETAVSSQTALVKRLRTEADELQSQILGLENDKASLINDKNSLNSQLRKMEEKMHGVQDLNQIVESQHMNLQTHFTEARCNLDHLAEKVHNFQQDDTEGERKSSVEAEAKHEVKGEDALNQDNILLKDVNLEKKHKATDSVEDEEKSRTGCVEDDAKSENKLVVTDSFKGDVKLDREVNKMPSETKEQEGTVNPESGDERTRDALSANTEKTAESSSDSFENMQEIDAKSDQEIKASITNITEEAKLPSELKEQKGTVNLDSGGEKIAESSSDSFKNQREIDDKPKSSDTQNSLEFEAQEQPRAQEDEPNWQKLFTDGLQDKERVLLAEYTITLRNFKDVKKKLTELENKNQGSDFDTSLQLKELKRAIASKDEEIRYLRQKLDLLQKSLEGNEELMKLNLPMPAENIDEMLKTEASDGTSAIEEKFRMSIDKLLEENLEFWLKFSTIFTEIQKFDTTINDLVTEASRLSEKLKASEGSTNSKYSLKSDARPMYKHLEEIRTELTVWLGKSALLKEELKCRFSSLCDIQEEITVALKASAEDDEFKFTSFQAAKFQGEILNMKQENNRVADELQAGVDHVTTLQLEVDKVLAKLNDQFGLSTTNRPQASHPRSVNSRVPLRSFIFGDHPKKQKPSFFSIVALGMHRKYRSRPKTPM 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0427 1031 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Lele56g0427 1031 MobiDBLite consensus disorder prediction 566 582 - -
Lele56g0427 1031 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Lele56g0427 1031 Coils Coil 250 277 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 647 665 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 467 493 - -
Lele56g0427 1031 PANTHER PROTEIN NETWORKED 2D 1 1025 - -
Lele56g0427 1031 Coils Coil 324 351 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 467 494 - -
Lele56g0427 1031 Coils Coil 359 442 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 620 667 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 309 334 - -
Lele56g0427 1031 Coils Coil 209 236 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 510 531 - -
Lele56g0427 1031 Coils Coil 181 201 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 551 603 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 583 598 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 108 137 - -
Lele56g0427 1031 Coils Coil 737 757 - -
Lele56g0427 1031 MobiDBLite consensus disorder prediction 302 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0427 Lele-ChrLele56 3165848 3169457 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1011 52 6674687 6681329 Lele56g0427 56 3165848 3169457 CCT
Lele53g1035 53 19727919 19728905 Lele56g0427 56 3165848 3169457 hybridization
Lele54g1019 54 16354308 16354598 Lele56g0427 56 3165848 3169457 hybridization