Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0423 ATGGCTCGTGCTACTAACTGGCTATCGTTTTCGCTGTCGCCGATGGAAATGTTGAGGTCGACCAACTCGCAGTTCCTTCAATACGACGCCGCTTCTGCTGCTCCTCACTACTTGGTCGATAACTTCTATGTCAATGGATGGGGAATCCACAAGCCCCACCTGTACACAGAAGTAGAGCTTAACGAGAATAAAGAAAGTCAAGCTGCTGGGAACATGGTGGAATCATCATTTGCCCCAGGTTTCATGGAACCCCAGAATCAGGAGCAGCCAGTTCCAAAACTCGAGGATTTTCTGGGGGATTCTTCGTCTTCTATTATGCGTTACTCTGATAGTCAAACGGATACTCCAGGTTCGTCGACCCTGACTCATATATACGACCAGGGCTCCGTTTACTTCAGCGACCAGCAAGATCTGAAAGCCATCGCTGGGTTCCAAGCTTTCTCAACCAACTCTGGCTCCGAAGTGGATGACTCGGCCTCCATCGGCAAAGCTCAACCCGCCGGTGGCGAGTTCGCGGCTCACTCGATTGAGTCGTCTGGGAATGAGCTGGCCTTCTCAAGTGGCACCACCACTGGAACTCTGTCCCTCGGCGTTACCACCACCCCACAATGTGGTGCCGATCAGAAAACCATAGTTCCGGTGGAATCCGATAGCTCCAAGAAGATAGCCGATACTTTCGGCCAAAGAACTTCGATTTACAGAGGAGTCACCAGACACCGGTGGACGGGTAGATATGAAGCGCATCTCTGGGATAACAGCTGTAGGAGAGAGGGTCAGGCCAGAAAAGGGCGTCAAGGTGGATACGACAAAGAAGACAAGGCCGCGAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGCCCCACTGCCACCACCAACTTCCCAGTCTCCAATTATGCAAAGGAGATGGAAGAGATGAAGCATGTAACAAAGCAAGAATTTATTGCCTCACTGCGAAGGAAAAGTAGCGGATTTTCCAGGGGAGCTTCTATATACAGGGGCGTGACAAGGCATCACCAACAAGGTAGATGGCAAGCTAGAATTGGCCGTGTTGCAGGGAACAAGGATCTGTACCTTGGAACATTTGCCACTGAAGAGGAAGCAGCTGAGGCATACGATATTGCAGCCATAAAGTTTAGGGGTGCAAATGCTGTAACCAACTTTGAGATGAGTAGATATGACGTTGAAGCCATCATGAAGAGTTCTCTTCCTATTGGCGGGGCGGCGAAACGCTTGAAGCTTTCGCTCGAATCCGAGCAGAAAGCGGCTCTGAACAATAATAGCCAGCCAATCCAAAGCACCAACATGATGAGTAACAGCATCAACTTCTCACCAATTCAGGCAGTTTCCTCTGTTCCTTGTGCAATCCCATTTCATCCCGCTACTACTGCATACTATCACCACAACCTCTTGAATCATTTTTGTCCTTCCGATGCCGCAGAATCTGCCGTATCTAACCCTTCTGCCACTCCGTATCCTAATACTCTGCCAGCACCTTCCGAGTTCTTTATATGGCCTCCTCATCATCAGTCATATTGA 1539 0.4964 MARATNWLSFSLSPMEMLRSTNSQFLQYDAASAAPHYLVDNFYVNGWGIHKPHLYTEVELNENKESQAAGNMVESSFAPGFMEPQNQEQPVPKLEDFLGDSSSSIMRYSDSQTDTPGSSTLTHIYDQGSVYFSDQQDLKAIAGFQAFSTNSGSEVDDSASIGKAQPAGGEFAAHSIESSGNELAFSSGTTTGTLSLGVTTTPQCGADQKTIVPVESDSSKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPTATTNFPVSNYAKEMEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVEAIMKSSLPIGGAAKRLKLSLESEQKAALNNNSQPIQSTNMMSNSINFSPIQAVSSVPCAIPFHPATTAYYHHNLLNHFCPSDAAESAVSNPSATPYPNTLPAPSEFFIWPPHHQSY 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0423 512 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 85 433 - -
Lele56g0423 512 SUPERFAMILY DNA-binding domain 231 297 IPR016177 GO:0003677
Lele56g0423 512 Gene3D AP2/ERF domain 331 391 IPR036955 GO:0003700|GO:0006355
Lele56g0423 512 Gene3D AP2/ERF domain 232 297 IPR036955 GO:0003700|GO:0006355
Lele56g0423 512 FunFam AP2-like ethylene-responsive transcription factor ANT 231 297 - -
Lele56g0423 512 PRINTS Ethylene responsive element binding protein signature 371 391 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 PRINTS Ethylene responsive element binding protein signature 233 244 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 SMART rav1_2 331 395 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 SMART rav1_2 232 301 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 FunFam AP2-like ethylene-responsive transcription factor 330 391 - -
Lele56g0423 512 ProSiteProfiles AP2/ERF domain profile. 232 295 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 ProSiteProfiles AP2/ERF domain profile. 331 389 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 Pfam AP2 domain 331 381 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 Pfam AP2 domain 232 287 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 SUPERFAMILY DNA-binding domain 330 391 IPR016177 GO:0003677
Lele56g0423 512 CDD AP2 330 391 IPR001471 GO:0003700|GO:0006355
Lele56g0423 512 CDD AP2 231 297 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0423 Lele-ChrLele56 3138463 3143015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0423 47 512 AP2-EREBP Transcription Factor Family AT5G10510 56.227 1.74e-169 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele56g0423 AP2 1.2e-08 CL0081