Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0408 ATGGCTTCACAACCAGAGACGGAGCATTCCACTAAGGCCTTCGGATGGGCTGCTAGGGATAAGTCTGGGGCTCTCTCTCCTTTCCACTTCTCTAGAAGGGAAACTGGAGAGAAAGATGTGACGTTCAAAGTGTTGTACTGCGGGATTTGCCACTCAGACCTACACATGATTAAGAATGAGTGGGGTATTTCCATCTATCCACTTGTACCCGGGCATGAAATTGTGGGAGAAGTAACAGAGGTGGGATGCAAGGTTGAGAAGTTCGAAGTTGGAGACAGGGTAGGTGTGGGATGCATGGTTGGTTCATGCGGCGGCTCGTGCCAAAGCTGTGCTGAAAATCTGGAAAATTACTGCCCAAAAATTATTCTCACGTATGGTGCCAAGTATGTGGATGGTAGCATCACATATGGAGGTTACTCTGACTTGATGGTTGCAGATGAGCACTTTGTGGTTCGCATTCCAGATAGCCTTCCTCTTGATGCAGCGGCTCCTCTGCTCTGTGCTGGGATCACTGTGTATAGTCCTTTGAGACATTTTGGACTAGACAAGCCTGATCTTCATGTTGGTGTGGTTGGTCTTGGTGGTTTAGGACACATGGCTGTGAAATTTGCCAAGGCGTTTGGTGCTAAGGTGACTGTAATAAGTACATCACCTGATAAGAAGGAGGAAGCTATAAAAACTCTAGGAGCTGACTTCTTTGTGGTCAGCCGGGAGCAAGATCAGATGCAGGGTGTAATGGGTACACTTGATGGGATCATTGACACAGTTTCTGCTGTGCATCCTCTCATGCCTTTGCTTGCTCTGTTGAAGACTCAAGGGAAACTCGTAATGGTGGGTGCCCCAGAGAAGCCTCTAGAACTACCAATCGTCCCTTTAATCATGGGGGGGAAGTTAGTAGGAGGGAGTGCCATTGGAGGGATGAAGGAGACACAAGAAATGCTTGATTTTGCTGCCAAGCACGATGTGAAACCTGAGATTGAGGTTGTTCCAATGGACTATGTCAACAACGCAATGGAGCGTCTCGCCAAGGCAGATGTGAAGTATCGATTTGTCATCGACATTGGGAATACACTAAATCCAAGCTCTTAA 1089 0.4747 MASQPETEHSTKAFGWAARDKSGALSPFHFSRRETGEKDVTFKVLYCGICHSDLHMIKNEWGISIYPLVPGHEIVGEVTEVGCKVEKFEVGDRVGVGCMVGSCGGSCQSCAENLENYCPKIILTYGAKYVDGSITYGGYSDLMVADEHFVVRIPDSLPLDAAAPLLCAGITVYSPLRHFGLDKPDLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPDKKEEAIKTLGADFFVVSREQDQMQGVMGTLDGIIDTVSAVHPLMPLLALLKTQGKLVMVGAPEKPLELPIVPLIMGGKLVGGSAIGGMKETQEMLDFAAKHDVKPEIEVVPMDYVNNAMERLAKADVKYRFVIDIGNTLNPSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0408 362 FunFam Putative cinnamyl alcohol dehydrogenase 6 325 354 - -
Lele56g0408 362 SMART PKS_ER_names_mod 23 352 IPR020843 GO:0016491
Lele56g0408 362 FunFam Uncharacterized protein 16 167 - -
Lele56g0408 362 FunFam Cinnamyl alcohol dehydrogenase 168 324 - -
Lele56g0408 362 Pfam Alcohol dehydrogenase GroES-like domain 38 152 IPR013154 -
Lele56g0408 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
Lele56g0408 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Lele56g0408 362 Gene3D - 168 324 - -
Lele56g0408 362 SUPERFAMILY GroES-like 20 184 IPR011032 -
Lele56g0408 362 Gene3D - 16 354 - -
Lele56g0408 362 PANTHER ALDEHYDE REDUCTASE 5 357 - -
Lele56g0408 362 CDD CAD1 14 353 - -
Lele56g0408 362 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0408 Lele-ChrLele56 3076287 3077860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0408 12 361 Monolignol Biosynthesis Gene Families AT4G37990 71.429 4.30e-173 484