Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0400 ATGGCCAACACTTTCTGCTACTCCCATCTTCTTCCTCTATTCTTCTTCTTCTTCTTCTCCTCTCTGTCTCTCTCTGTTAATTCACTGTATCTTCAAAAGTCTGAATTTAGCTCTAATGATGCCGACATACTCTACCTAGGATCTGCAGGAACTCAGTTTGGTACTGTTCAATTCAACATTTATGAAGGGTATACTTGTCAAGCAGGATGGGCCATCTATGCAAAAAGGGTAAAACTTTGGGACTCAGGCACAGGACGTGTCACTGACTTCACCTCTCATTATACTTTCATAATAGATACTGAAGGTAAAAGTAATTATGGCCATGGACTTTGCTTCTTCCTCGCTCCTTTTAGTTTTGAAATCTCTCCAAATTCTGCTAGTGGCTTTCTAGGCCTATTCAATGCCACAACTCGTCTTTCTTCCCCGAAACAGATTGTTCATGTGGAGTTCGACTCTTATGCAAATTCTGAATGGGGTGAGACCATGGAACATGTGGGAATTAATAATCATTCTCTTGTTTCCTCAGTGGCCACGTTTTGGAATGCTAGTTTACATAGTGATGATGTTGCAGATGTGTGGATTACCTACAATTCTGCATCGAAGAACTTGAGTGTCTCATGGAAATACCAGAAAACACATAGTCCTCAAGAGAACACTAGTCTTTCTTATCTGATTGATTTATCCAAGGCATTGCCTGAGTGGGTAACAGTTGGATTTTCTGCTGCAACAGGATCAATTGGAGAAATTCACACTCTTCTTTCTTGGGAGTTCAACTCAACTTTGGATGATACAGAACAGAACAAAAACAACACAACACTTGCGGTGATTCTGAGTACTGTTTTAGGGAGTATTGTTTTGGTAGTTGGAGGAGCAATTGTAGCATATGCATTACTTTGGAGGAAGAAGAAATGCAAAAAGGAAGACGCTATGAACTTAACATCAATGAATGATGATCTTGAAAGAGGAGCTGGACCGAGAAGATTCTCTCACAGAGAGCTTGCTAAAGCTACCAATAATTTCTGTGAGGGCAGGAAGCTGGGTCAAGGTGGGTTTGGAGCTGTTTACCGAGGTTATTTTCCTGAAATAGATTTAACTGTCGCAGTGAAGAAAGTATCAAGAGGATCAAGGCAAGGGAAAAAAGAGTATGTAACTGAGGTTAAGATCATTAGTCAGCTAAGACACAGGAATCTCGTGCAGCTCATTGGTTGGTGCCATGACAAAGGCGAGTTCCTACTTGTTTACGACTTCATGCCAAATGGTAGCCTTGATGTTCATTTGTCAGGGAAGAAGTCCCCTCTTCCATGGAACGTGAGGCACAAGATAGCTCTAGGATTGGCCTCAGGAGTGCTCTATCTTCATGAAGAATGGCAACAATGCGTAGTTCATAGAGACATCAAATCAAGCAATGTGATGCTAGATTCCAGTTTCAATGTAAAACTTGGAGACTTTGGGTTGGCCAAGCTCGTGGACCACGATCTGGGACCCCAAACAACAGGATTGGCTGGCACAATGGGCTATATGGCTCCAGAATATTTGAGTACAGGTAGGGCTAGTAAGGAGTCAGATGTTTATAGTTTTGGGGTAGTTGTCTTGGAGATAGCCACAGGAAGGAAGGCGAATGACCTTATGAAGGATGGAGATGCGGAAGTAGGATTGATTGAGTGGGTTTGGGATCATTATGGGAGAGGAGAGCTAGCTTTGGCCATGGATGAAATATTGCAGAAGGACTGTAATGAGAGAGAAGTGGAGTGCTTGATGATTGTAGGGTTGTGGTGTGCCCACCCAGATAAGACTTTGAGGCCAACTATTAGGCAAGCAATTCAGGTGTTATGCTTTGAGGCTGCCATGCCAGACCTTCCACCAAAGAAGCCTGTTCCAATGTATCATGTTCCAACACCAAAAATGGTCTCCGGAGCTGCTTACGTGACCACAACCATTCAAACAGGTCGTTGA 1953 0.4291 MANTFCYSHLLPLFFFFFFSSLSLSVNSLYLQKSEFSSNDADILYLGSAGTQFGTVQFNIYEGYTCQAGWAIYAKRVKLWDSGTGRVTDFTSHYTFIIDTEGKSNYGHGLCFFLAPFSFEISPNSASGFLGLFNATTRLSSPKQIVHVEFDSYANSEWGETMEHVGINNHSLVSSVATFWNASLHSDDVADVWITYNSASKNLSVSWKYQKTHSPQENTSLSYLIDLSKALPEWVTVGFSAATGSIGEIHTLLSWEFNSTLDDTEQNKNNTTLAVILSTVLGSIVLVVGGAIVAYALLWRKKKCKKEDAMNLTSMNDDLERGAGPRRFSHRELAKATNNFCEGRKLGQGGFGAVYRGYFPEIDLTVAVKKVSRGSRQGKKEYVTEVKIISQLRHRNLVQLIGWCHDKGEFLLVYDFMPNGSLDVHLSGKKSPLPWNVRHKIALGLASGVLYLHEEWQQCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLVDHDLGPQTTGLAGTMGYMAPEYLSTGRASKESDVYSFGVVVLEIATGRKANDLMKDGDAEVGLIEWVWDHYGRGELALAMDEILQKDCNEREVECLMIVGLWCAHPDKTLRPTIRQAIQVLCFEAAMPDLPPKKPVPMYHVPTPKMVSGAAYVTTTIQTGR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0400 650 SUPERFAMILY Protein kinase-like (PK-like) 324 634 IPR011009 -
Lele56g0400 650 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Lele56g0400 650 FunFam Lectin-domain containing receptor kinase A4.3 417 630 - -
Lele56g0400 650 Gene3D Transferase(Phosphotransferase) domain 1 417 631 - -
Lele56g0400 650 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Lele56g0400 650 Pfam Legume lectin domain 34 269 IPR001220 GO:0030246
Lele56g0400 650 CDD lectin_legume_LecRK_Arcelin_ConA 34 261 IPR001220 GO:0030246
Lele56g0400 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 266 IPR013320 -
Lele56g0400 650 PANTHER - 52 611 - -
Lele56g0400 650 Pfam Protein kinase domain 342 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0400 650 SMART serkin_6 340 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0400 650 Gene3D - 28 283 - -
Lele56g0400 650 CDD STKc_IRAK 346 611 - -
Lele56g0400 650 ProSiteProfiles Protein kinase domain profile. 340 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0400 650 FunFam L-type lectin-domain containing receptor kinase IX.1 325 416 - -
Lele56g0400 650 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Lele56g0400 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0400 Lele-ChrLele56 3023365 3025317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0400 26 650 Receptor kinase-like Gene Family AT5G10530 57.053 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele56g0400 Pkinase 9.8e-49 CL0016