Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0397 ATGAGGTTGCATGGATTGAAGCTTGAAAATAAGGGGATGATGACCCTTCTTTCAGGCCATAATGATGGAGAAATTGGATATCTGGATATTCAGACTTGTTCTGATATTTGTATCAGATCATCTTCTGCAAGGGAAGGATTTGTAAGCATAGCTTGCTGTGCTGATTCAGAATATACAGGTCCAGAGACAAACTTGAGTTATAAATCAGATTACACTTGGTTTCCAGATAGAACAAGCTGCATAAGCTTGAACAATCATAAGGCAAACCAAACAGACAACGAAAGAGCAAGAGTGTTTGATATTGCAGATAAGGGAAAGAGATGTTACAGCTTGCCAACAATTCAGGACAAAGTCTATATGTTAAGGGGCTCATTTCCGTCTGATAATTCACTTGAAGATTTTTCCTTTAATGTGTCAATCGCAGGAACATCATTAGGTTCAGTAAGACCATCCCAGGACTTGAAAATAGTTGAAGGAATTTTCAGAGCTTCTAAGAACTCCACAGACTTTTGCTTAGTGAAGGAGGAGCAAGAAGATGGGAATCCTTATATTTCGCAGATCGATTTAAGGCCTTTGCATGAAGAGTATCTGCACGATTTACCTTCTAGTGTTCTAAAACTGGTCAGTAGAAATAATCCAGGGGGCACAGTAAGTGAGATCAGGTACCCAAAAGACCCAAATGACCGAATCTGGAAAGAAACTTCAAGCTCATCAGCATCTCCCATATCATCATTCAATGTCATCATTTCTGGCCAAATTGCTAATGTGACTCCTCCTCTTCAAGTTTTACAAACTGCTTTCACTCATTCCGAGAGATTGGAGTTCATTCACAATGTCTCAGAGACATGGAACCATGACTACCACGTGTTCCTCTACATCCTTGAACTAAACAACACTGTTAGGTCAGGCCAAAGAGTGTTTGACATCTATCTTAATGGTGACCTTAAAGAGAAGAGTTTTGATATACTGGCTGGAGGATCCAACTATAGACACACAGTGCTGAACGTTTCATCAAATGGTGCAATCAATTTAACCTTGGCCAAAGAATCTAGTTCTGAGTATGGACCACTTTGTAATGCGTATGAAATTCTGGAGGAAATGCTGAAGGTGGCAGAAGAGTTGAAGATGCATAACCAAGACAATAAAGTGCTAGAGAGTTGGAGTGGAGACCCATGCAAGCCTTTTCCTTGGAATGGAGTAGAATATCTGAGCTACAATGATCTCACGGGATCGCTTCAGGGATCAACTGCCTCACTGTCACATCTAAAATCCTTATATTTCGGCTGCAATCCTGACATGAGCAAGGAAGTCCCATCAAACTTCAACAGCTCACTTGATACAGATCTTGGAAGATGCAATTATAAAAGATCAAGAATTTCAGCACTCATCATTGGAACCGTTACATGTGGGTTGATCTTGCTTACTTTGGCTGTCGGATTTCTTTTTGTTTGCCATTATAAGAAAATATCAATTCCCTGGGGAGGAGTTGATGAAAAGAAATACCCTAACCCAATGGCAACAAATATAATCTTCTCTTTGCCCAGTAAAGACGCTTTCTTTGTGAAGTCAGTGTGTATTCAAAAGTTTACCCTGGACTATATAGAGGCAGCCACCCAGAAGTACAAAACATTAATAGGTGAAGGAGGATTTGGCTGTGTTTACAGGGGCATTCTAGAAGATTGTCAAGAAGTGGCAATGAAAGTCCGGTCAGCCACATCAACTCAGGGAACTAAGGAATTTGACAATGAGCTAAATCTGCTTTCCAAGGTACAGCACGAAAACTTGGTGCCTCTTCTTGGTTACTGTAGCGAAAATGATCAGCAAATTCTGGTGTACCCCTTCATGTCCAATGGCTCTTTACAGGATAGACTTTATGGAGAAGCAGAGAAGAGAAAGGTATTAGATTGGCCAACCAGACTTTCAATTGCTGTGGGTGCAGCTCGAGGAGACATCGGAGCTTCTCTTGAACTAAGGAACAGCAGGATATCTGGATCCCGAGGAAAGCCATATATAAGAGCAGCAAATATTGATGAAATAGTGGATCCTGGGATAAGAGGAGGATATCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACACTCATGTGTTGAAAGCTTGTCAAGATTCAGACCTGAGATGGAGGATGTTGTTAGAGAGTTGGAAGATGCTCTAATTATAGAGAACAATGCATCAGAATACATGAAGTCCATTGAGAGCCTTGGAGGCTCCAATCGCTACTCCATTGTAATAGACAAAAGGGTGGTCCCACCATCTTTGTCTACAACTAATTCAGCCATCATAGATCAAACCATATCTTTTCCACACTCCAGATAG 2337 0.4112 MRLHGLKLENKGMMTLLSGHNDGEIGYLDIQTCSDICIRSSSAREGFVSIACCADSEYTGPETNLSYKSDYTWFPDRTSCISLNNHKANQTDNERARVFDIADKGKRCYSLPTIQDKVYMLRGSFPSDNSLEDFSFNVSIAGTSLGSVRPSQDLKIVEGIFRASKNSTDFCLVKEEQEDGNPYISQIDLRPLHEEYLHDLPSSVLKLVSRNNPGGTVSEIRYPKDPNDRIWKETSSSSASPISSFNVIISGQIANVTPPLQVLQTAFTHSERLEFIHNVSETWNHDYHVFLYILELNNTVRSGQRVFDIYLNGDLKEKSFDILAGGSNYRHTVLNVSSNGAINLTLAKESSSEYGPLCNAYEILEEMLKVAEELKMHNQDNKVLESWSGDPCKPFPWNGVEYLSYNDLTGSLQGSTASLSHLKSLYFGCNPDMSKEVPSNFNSSLDTDLGRCNYKRSRISALIIGTVTCGLILLTLAVGFLFVCHYKKISIPWGGVDEKKYPNPMATNIIFSLPSKDAFFVKSVCIQKFTLDYIEAATQKYKTLIGEGGFGCVYRGILEDCQEVAMKVRSATSTQGTKEFDNELNLLSKVQHENLVPLLGYCSENDQQILVYPFMSNGSLQDRLYGEAEKRKVLDWPTRLSIAVGAARGDIGASLELRNSRISGSRGKPYIRAANIDEIVDPGIRGGYHAEAMWRVVEVAHSCVESLSRFRPEMEDVVRELEDALIIENNASEYMKSIESLGGSNRYSIVIDKRVVPPSLSTTNSAIIDQTISFPHSR 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0397 778 Gene3D Transferase(Phosphotransferase) domain 1 661 741 - -
Lele56g0397 778 Pfam Protein tyrosine and serine/threonine kinase 542 649 IPR001245 GO:0004672|GO:0006468
Lele56g0397 778 Gene3D Ribonuclease Inhibitor 367 461 IPR032675 -
Lele56g0397 778 ProSiteProfiles Protein kinase domain profile. 539 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0397 778 PANTHER OS07G0107800 PROTEIN-RELATED 670 725 - -
Lele56g0397 778 Gene3D - 206 366 - -
Lele56g0397 778 ProSitePatterns Protein kinases ATP-binding region signature. 545 567 IPR017441 GO:0005524
Lele56g0397 778 SUPERFAMILY Protein kinase-like (PK-like) 532 725 IPR011009 -
Lele56g0397 778 Gene3D Transferase(Phosphotransferase) domain 1 519 649 - -
Lele56g0397 778 Pfam Malectin-like domain 54 363 IPR024788 -
Lele56g0397 778 FunFam receptor-like protein kinase FERONIA 512 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0397 Lele-ChrLele56 3001252 3006244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0397 40 649 Receptor kinase-like Gene Family AT2G37050 27.426 1.08e-53 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele56g0397 Malectin_like 7.5e-47 CL0202