Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0394 ATGGAGCTCACACAGCTTGGTTTTCTGGAAGAGTTACTCGCTCCAAGAAGAGCAGACTCATGGGCTACTATGCCCTCTGGCTTCAATGAACTCTTCCCTTCTACCTCTTGGAGTTTCGACTCTTTTGATGACAACCCTTCTTTATCTTCCGTCAATCCTCCATTTTCTGCACTTCCCTCACCACTCATAGACCAGAGACTTGAATATAATTCCTACCCATTTCTTGATGGCTTCACCGGGAACATTCTTGACTCTGCACCACCACTTCAAGCTCATGAAGACGAAGAGCTTGCCTTTCTGGGTTTAGAGAATCAGAGTTCTGAAGAAGCAAATACCAACAATAATGCCAGTAATTGTTGCAAAATCGAAGAACAAGCCTTGGAAGCTCCAGTGTTCAACATGGGCGTGTGTTGTTCCGAGAAGAAACCCAAATCGAAGAAGCTAGAAGGGCAGCCCTCCAAGAATCTCATGGCGGAAAGAAGAAGAAGAAAGCGCCTCAATGATCGCTTGTCCATGCTAAGATCAATCGTCCCCAAGATCAGCAAGATGGACAGGACATCTATTCTTGGAGACACCATAGATTACATGAAGGAGCTTCTGGAAAAGATAAGCAAGTTGCAGGAAGAAATGGAGAAGGAGGGTGAAAATAATCGGTGGAACTTCATAGGCATTTCCAAGGAGGCGAAGCCAAGTGAAGTAATGTTGAGAAATGCCCCTAAGTTTGATGTTGAGAGGAGAGACCAGGACACAAGGATCAATATCTGCTGTGCCACAAAGCCTGGATTATTACTCTCAACAGTGAATACCTTGGAAGCATTAGGTCTTGAGATTCAACAATGTGTAATAAGTGGTTTCAATGATTTCACAATGCAAGCATCTTGCTCAGAGGTGGCTGAGCAGAGAGCATGTATTGGCACTGAAGAGATTAAGGAAGCACTGTTCAGAAATGCAGGTTATGGTGGGAGATGTCTGTAG 975 0.4451 MELTQLGFLEELLAPRRADSWATMPSGFNELFPSTSWSFDSFDDNPSLSSVNPPFSALPSPLIDQRLEYNSYPFLDGFTGNILDSAPPLQAHEDEELAFLGLENQSSEEANTNNNASNCCKIEEQALEAPVFNMGVCCSEKKPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKISKLQEEMEKEGENNRWNFIGISKEAKPSEVMLRNAPKFDVERRDQDTRINICCATKPGLLLSTVNTLEALGLEIQQCVISGFNDFTMQASCSEVAEQRACIGTEEIKEALFRNAGYGGRCL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0394 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 214 IPR036638 GO:0046983
Lele56g0394 324 Pfam Helix-loop-helix DNA-binding domain 156 199 IPR011598 GO:0046983
Lele56g0394 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 150 199 IPR011598 GO:0046983
Lele56g0394 324 Gene3D - 141 217 IPR036638 GO:0046983
Lele56g0394 324 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 61 318 - -
Lele56g0394 324 SMART finulus 156 205 IPR011598 GO:0046983
Lele56g0394 324 Coils Coil 193 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0394 Lele-ChrLele56 2976659 2977897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0394 139 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 66.129 4.58e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele56g0394 HLH 6.7e-10 No_clan