Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0390 ATGGCCGGGAACGGTAACGGAGATTTCAGCTTTGGAAATGGGAACGGTACGGCACGCAACGGGCTGGCGAAGATTCAGACGCACAAGAAGCAGAACGAGGTTTGCCACGACGACAGTGCTCCTCCGGTGAAGGCTCAAACCATTGACGAGCTTCACTCGCTCCAGAGGAAGAAGTCTGCTCCTACCACTCCCATAAAAAACCCTCAGAATACCTTCGCCACTTTGTCCGATGACGACCGCCAGAAACAGCAGCTTCAATCCATCAGTGCTTCTTTGGCTTCGCTGACGAGGGAAACTGGACCGAAGGTGGTGAAAGGAGACCCAGCCAGGAAATCGGAACGCACTACGGTGGCTCATGTATCGCACCACCTTGTCGCACCCACTATCAGCGTCAGCGACAGTTCCTTGAAATTTACTCATGTTCTCTACAATCTCTCCCCAGCTGAACTGTATGAGCAGGCGATTAAGTATGAAAAAGGGTCTTTCATCACTTCTACGGGAGCCTTGGCAACACTTTCTGGTGCGAAGACCGGACGATCTCCCAGAGATAAACGTGTAGTAAAAGATGATGATACTGAGGCTGAGCTTTGGTGGGGAAAGGGTTCCCCGAACATTGAGATGGACGAGCATACTTTCTTGGTAAACAGAGAAAGAGCTGTCGATTACTTGAACTCGTTGGATAAGGTCTATGTCAATGATCAATTCTTGAACTGGGAACCCAAGAATAGAATCAAAGTCAGGATAGTCTCTGCCAGAGCTTACCATTCATTGTTTATGCACAACATGTGTATCCGACCCACTCCTGAAGAGCTGGAGGAATTCGGTACTCCGGACTTCACTATATACAATGCTGGACAGTTCCCGTGTAATCGTTATACTCACTACATGACATCCTCCACTAGCATAGACATTAATCTTGCTAGGAGGGAAATGGTCATCCTCGGCACTCAGTACGCCGGGGAAATGAAGAAGGGTCTTTTCGGTGTTATGCATTATCTCATGCCTAAGCGTCAAATCCTCTCTCTTCATTCTGGCTGCAACATGGGCAAAGATGGCGATGTTGCTCTCTTCTTTGGTCTCTCAGGTACCGGAAAGACCACTCTTTCTACAGATCATAATAGGTATTTGATTGGAGATGATGAACATTGTTGGAGTGAGAATGGTGTCTCAAACATCGAAGGTGGCTGCTATGCCAAGTGTATTGATCTTTCCAGGGAGAAAGAACCTGATATTTTTAATGCAATCAAATTCGTTTTGGAAAACGTCGTGTTTGATGAGCATACCCGCGAAGTAGATTATGCTGACAAATCAGTTACAGAAAACACTCGAGCAGCTTATCCCATTGAGTATATACCGAATGCAAAGTTACCATGCGTGGGACCTCATCCAAAGAATGTTATACTTTTGGCATGTGATGCATTTGGGGTGCTCCCACCTGTGAGTAAGCTAAGCTTGGCTCAGACCATGTATCATTTCATCAGTGGATATACCGCCCTGGTGGCTGGTACTGAAGATGGTATAAAGGAGCCTCAGGCTACATTCTCAGCTTGTTTTGGTGCAGCATTTATAATGCTACACCCTACTAAATATGCTGCAATGCTTTCTGAAAAGATGCAGAAGCATGGCACTACCGGATGGCTCGTCAACACCGGTTGGTCTGGTGGGAGCTATGGTTCTGGAAGTCGTATCAAACTGTCATACACAAGGAAAATTATTGATGCCATTCACTCGGGAAGCCTCTTGCAGGCAAATTACAAAAAGACTGAGATTTTTGGGCTTGAGATTCCTACTGAAGTAGAAGAAGTTCCTTCTGAAATTCTGGAACCAGAGAACACATGGTCAGACAAACAGGCATACAAGGATACTCTGTTGAAGCTAGCTGGTTTGTTCAAGAACAATTTTGAAACCTTCACAAACTACAAGATGGGGAAGGACAGCAGTTTGACTGAAGAGATTCTTGCTGCTGAGCGAAAGAGAGTGGCTGAGATTTGGCTTTTCCTCCCATTTCCTTTCCCCCCTTCCCTTCTGACAATCTCTGTCGTATCTGCGCCTCTCTCTCCCTCTCTGGGTTGCATCTCAGCCACACTCGCGCTCTCCCTTACCCCCCACACATCCCTCTTGTGGCTCTGCATCTCCAGCAAAGATAGTTTTGCTGTTCTGTCTTGTTTGTTTAATCTCAGATTCGTCTATCTGATTCATTTTCATTCTGCTTTACATCTGATTCTTTGGGACCCAACTAAGGTCACGATGGGAGATGTGGCTAAGGACCTTACTGCAGGGACTGTTGGAGGGGCAGCACAATTGATATGTGGACACCCATTTGACACCATAAAGGTCAAGCTTCAAAGCCAGCCCACACCAGCCCCTGGCCAACCTCCCAAGTATGCTGGCGCCATGGACGCAGTCAAGCAAACATTAGCAGCTGAAGGCCCAAGGGGTTTGTACAAAGGTATGGGCGCTCCACTTGCGACGGTGGCAGCTTTCAATGCTGTCCTGTTCACGGTAAGGGGACAAATGGAGGCATTGTTGAGATCGCATCCCGGTGCCCCTCTTACAGTAAACCAGCAGGTTGTTTGTGGAGCTGGTGCTGGAGTTGCTGTTTCCTTCCTTGCTTGCCCCACGGAGCTAATCAAATGCAGGCTGCAAGCACAAAGTGCACTAGCAGGTTCTGGAACAGCTACTCTGGCTGTGAAGTATGGAGGACCCATGGATGTGGCCCGGCAAGTTCTCAGGTCAGAAGGGGGTATAAAAGGTCTTTTCAAGGGCATGTTTCCGACAATGGCTCGGGAAGTACCCGGAAATGCTATAATGTTTGGTACATATGAAGCAGTAAAGCAGTTAATTGCAGGAGGCAAGGATACTTCTGGACTTGGTAGAGGTTCTTTGATAGTTGCTGGAGGCTTGGCTGGAGCTTCCTTCTGGGGTTTAGTGTACCCAACTGATGTTGTGAAGAGTGTGATTCAGGTAGATGATTACAGAAATCCCAAGTATTCTGGTTCATGGGATGCCTTTAGAAAGATTAAAGCTTCAGAGGGATTAAAAGGCCTTTACAAAGGTTTTGGTCCTGCAATGGCACGAAGTGTTCCTGCAAATGCCGCTTGCTTCTTGGCTTATGAAGTGACAAGATCAGCTCTGGGCTGA 3141 0.4734 MAGNGNGDFSFGNGNGTARNGLAKIQTHKKQNEVCHDDSAPPVKAQTIDELHSLQRKKSAPTTPIKNPQNTFATLSDDDRQKQQLQSISASLASLTRETGPKVVKGDPARKSERTTVAHVSHHLVAPTISVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSTGALATLSGAKTGRSPRDKRVVKDDDTEAELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVYVNDQFLNWEPKNRIKVRIVSARAYHSLFMHNMCIRPTPEELEEFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARREMVILGTQYAGEMKKGLFGVMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWSENGVSNIEGGCYAKCIDLSREKEPDIFNAIKFVLENVVFDEHTREVDYADKSVTENTRAAYPIEYIPNAKLPCVGPHPKNVILLACDAFGVLPPVSKLSLAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLSEKMQKHGTTGWLVNTGWSGGSYGSGSRIKLSYTRKIIDAIHSGSLLQANYKKTEIFGLEIPTEVEEVPSEILEPENTWSDKQAYKDTLLKLAGLFKNNFETFTNYKMGKDSSLTEEILAAERKRVAEIWLFLPFPFPPSLLTISVVSAPLSPSLGCISATLALSLTPHTSLLWLCISSKDSFAVLSCLFNLRFVYLIHFHSALHLILWDPTKVTMGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPTPAPGQPPKYAGAMDAVKQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSHPGAPLTVNQQVVCGAGAGVAVSFLACPTELIKCRLQAQSALAGSGTATLAVKYGGPMDVARQVLRSEGGIKGLFKGMFPTMAREVPGNAIMFGTYEAVKQLIAGGKDTSGLGRGSLIVAGGLAGASFWGLVYPTDVVKSVIQVDDYRNPKYSGSWDAFRKIKASEGLKGLYKGFGPAMARSVPANAACFLAYEVTRSALG 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0390 1046 Gene3D - 346 638 IPR013035 GO:0004611|GO:0006094|GO:0017076
Lele56g0390 1046 Gene3D Phosphoenolpyruvate Carboxykinase, domain 2 158 459 - -
Lele56g0390 1046 MobiDBLite consensus disorder prediction 8 27 - -
Lele56g0390 1046 FunFam Phosphoenolpyruvate carboxykinase (ATP) 379 459 - -
Lele56g0390 1046 MobiDBLite consensus disorder prediction 57 78 - -
Lele56g0390 1046 SUPERFAMILY PEP carboxykinase-like 339 657 - -
Lele56g0390 1046 Pfam Mitochondrial carrier protein 852 949 IPR018108 -
Lele56g0390 1046 Pfam Mitochondrial carrier protein 963 1045 IPR018108 -
Lele56g0390 1046 Pfam Mitochondrial carrier protein 753 844 IPR018108 -
Lele56g0390 1046 Pfam Phosphoenolpyruvate carboxykinase 140 605 IPR001272 GO:0004612|GO:0005524|GO:0006094
Lele56g0390 1046 TIGRFAM pckA: phosphoenolpyruvate carboxykinase (ATP) 138 640 IPR001272 GO:0004612|GO:0005524|GO:0006094
Lele56g0390 1046 SUPERFAMILY Mitochondrial carrier 752 1039 IPR023395 -
Lele56g0390 1046 FunFam Uncharacterized protein 227 345 - -
Lele56g0390 1046 Gene3D Mitochondrial carrier domain 735 1045 IPR023395 -
Lele56g0390 1046 ProSiteProfiles Solute carrier (Solcar) repeat profile. 957 1044 IPR018108 -
Lele56g0390 1046 PANTHER PHOSPHOENOLPYRUVATE CARBOXYKINASE ATP 74 655 IPR001272 GO:0004612|GO:0005524|GO:0006094
Lele56g0390 1046 MobiDBLite consensus disorder prediction 1 78 - -
Lele56g0390 1046 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 751 1045 - -
Lele56g0390 1046 Gene3D Phosphoenolpyruvate Carboxykinase, domain 1 139 345 IPR008210 GO:0004611|GO:0006094|GO:0017076
Lele56g0390 1046 ProSitePatterns Phosphoenolpyruvate carboxykinase (ATP) signature. 376 391 IPR015994 GO:0004612|GO:0005524|GO:0006094
Lele56g0390 1046 ProSiteProfiles Solute carrier (Solcar) repeat profile. 751 842 IPR018108 -
Lele56g0390 1046 CDD PEPCK_ATP 139 655 IPR001272 GO:0004612|GO:0005524|GO:0006094
Lele56g0390 1046 SUPERFAMILY PEP carboxykinase N-terminal domain 139 337 IPR008210 GO:0004611|GO:0006094|GO:0017076
Lele56g0390 1046 Hamap Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 134 659 IPR001272 GO:0004612|GO:0005524|GO:0006094
Lele56g0390 1046 ProSiteProfiles Solute carrier (Solcar) repeat profile. 851 947 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0390 Lele-ChrLele56 2927143 2936353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0390 771 1045 Antiporters AT1G79900 35.461 3.15e-39 146