LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele56g0376	ATGGGTAGGCCACCATGCTCTGAGGAGACTGGTGTGAAGAAAGGGCCATGGACGCCTGAAGAAGATGAGAAGCTTATCAAGTATATCAGCAAACATGGCAATGGAAATTGGAAAGCAGTTCCAAAGCATGCCGGCCTCAATAGATACGGCAAAAGTTGCAGGCTAAGGTGGACCAACTATCTTAGGCCTGATATCAAGAGAGGCAAATTCACTGAAGAAGAGGAGCAATTGATCATCAACCTTCATTCTGTTCTTGGAAACAAGTGGTCAAAGATTGCAACGCATCTTCCAGGGAGGACTGACGACGAGATTAAGAATTTCTGGAACACAAATTTAAGGAAGAAGCTTCTGCAGATGGGTATTGATCCAGAAACTCACCAGCCAAGAACTGACTTGAAGCATCTCTTGAATCTCTCGCAGTTGCTTGGCAGCATGCCTAATAATAATTTGATGAGCCATGAGGGTCTGCAGGGTTTACTGCAACCAGATTTGACTCATCAGTTAGCCCAAATCAAACTTCTGCAGAATCTGTTGCAGCTTATGAATGGCAATTCATCGGTGGCTCTCCTCAACAACTTGAGAGAGCAAGAATTATATGCAAGCCCTGCTCTATTTCCTTCGGCACCAAGTGAATCGCGGCAGGATGTTTCAGAATCATGGACAGACCAAGAAGGAGCATCATCAGATCAAGAAGTTTCTGGTATTAATAATAGTATCAGCGGAACATCATCACATGACATAAGTCAAGCAGAAAACCTAGTTCCTAAGTTTGATTCAACCACGTCCTTCACTCAAATGGAGAATGGCCCTATTACAGATGAAGTGCCAGCCCAGTCAACCTCATCCACAATCTATGATACTATTTGGTAG	870	0.4391	MGRPPCSEETGVKKGPWTPEEDEKLIKYISKHGNGNWKAVPKHAGLNRYGKSCRLRWTNYLRPDIKRGKFTEEEEQLIINLHSVLGNKWSKIATHLPGRTDDEIKNFWNTNLRKKLLQMGIDPETHQPRTDLKHLLNLSQLLGSMPNNNLMSHEGLQGLLQPDLTHQLAQIKLLQNLLQLMNGNSSVALLNNLREQELYASPALFPSAPSESRQDVSESWTDQEGASSDQEVSGINNSISGTSSHDISQAENLVPKFDSTTSFTQMENGPITDEVPAQSTSSTIYDTIW	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele56g0376	289	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR	1	256	-	-
	Lele56g0376	289	FunFam	Transcription factor MYB39	69	130	-	-
	Lele56g0376	289	MobiDBLite	consensus disorder prediction	207	247	-	-
	Lele56g0376	289	Gene3D	-	12	67	-	-
	Lele56g0376	289	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	62	116	IPR017930	-
	Lele56g0376	289	SMART	sant	13	63	IPR001005	-
	Lele56g0376	289	SMART	sant	66	114	IPR001005	-
	Lele56g0376	289	SUPERFAMILY	Homeodomain-like	11	108	IPR009057	-
	Lele56g0376	289	MobiDBLite	consensus disorder prediction	205	247	-	-
	Lele56g0376	289	ProSiteProfiles	Myb-like domain profile.	9	61	IPR001005	-
	Lele56g0376	289	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	12	61	IPR017930	-
	Lele56g0376	289	FunFam	MYB-related transcription factor	13	66	-	-
	Lele56g0376	289	MobiDBLite	consensus disorder prediction	261	289	-	-
	Lele56g0376	289	CDD	SANT	16	61	IPR001005	-
	Lele56g0376	289	ProSiteProfiles	Myb-like domain profile.	62	112	IPR001005	-
	Lele56g0376	289	Pfam	Myb-like DNA-binding domain	67	112	IPR001005	-
	Lele56g0376	289	Pfam	Myb-like DNA-binding domain	14	61	IPR001005	-
	Lele56g0376	289	CDD	SANT	69	112	IPR001005	-
	Lele56g0376	289	Gene3D	-	68	135	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele56g0376	Lele-ChrLele56	2835391	2836566	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele56g0376	1	188	MYB Transcription Factor Family	AT5G16770	64.021	1.31e-80	245

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lele56g0376		Myb_DNA-binding	3e-18	CL0123