Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0375 ATGGGTAGGCCGCCGTGTTGTTGTGATGAGAGTGGTACTATGAAGAGAGGACCATGGACACCTGAAGAAGATGACAAGCTTTCTGATTATATCAGCAAACATGGCACTGGAAATTGGAGAACAGTTCCAAAGCATTCAGGGAGGACTGATAATGAGATTAAGAATTTCTGGAACACCATTTTAAGGAAGAAGCTTCTGCAGATGGGTATTGATCCAGAAACTCACAAGCAAAGAACTGACATGAAGTATCTCTTAAATCTCTCGCAGTTGCTTGGCAGTATGCCTAATAATAATAACTTGATGACGCATGCGGGTTTGCAGGGTTTACTGCAACCAGATTTGACTCATCAGTTAGCCCAAATCCAACTTCTGCAGAATCTGTTGCAGCTTATGAATGTCAATTCATCGCTTGTCAATAACATGCAGAGTAATTTCCCACTCTTGGGCAATAACAGTTTGATCAATAACCCAATAATGAAAGAAGATTCAAATGGTCTAAACAGTGCTCTCACCAACAACTTGAGAGAGCAAGAATTATATCCAAGCCCTGCTCTTTTTCTTGATCCAGCTCTAAGCGACACACACCAGGATATTTCAGAATCATGGGAAAACCTAGAAGGAGCGTTAGATCAACAAGCTTTTGATATCAATTCATCACATGAATTGAATCAAGCTGAAAATCCATTTCCTGCAACTGGTTCAGCCAACTTCAACCAAATGGAGAGATCCAATATCGATGAAATAATAATGTCTCAATCCTCAGCCTTTGATGCTTGGGAAAAACTACTCTTGGAAGATGATACGAGCGATGATTCCTACTGGAAAGAACTTTTAGAATCGCCGATTTCCTGGTAG 855 0.4058 MGRPPCCCDESGTMKRGPWTPEEDDKLSDYISKHGTGNWRTVPKHSGRTDNEIKNFWNTILRKKLLQMGIDPETHKQRTDMKYLLNLSQLLGSMPNNNNLMTHAGLQGLLQPDLTHQLAQIQLLQNLLQLMNVNSSLVNNMQSNFPLLGNNSLINNPIMKEDSNGLNSALTNNLREQELYPSPALFLDPALSDTHQDISESWENLEGALDQQAFDINSSHELNQAENPFPATGSANFNQMERSNIDEIIMSQSSAFDAWEKLLLEDDTSDDSYWKELLESPISW 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0375 284 CDD SANT 18 61 IPR001005 -
Lele56g0375 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 65 IPR017930 -
Lele56g0375 284 SMART sant 15 63 IPR001005 -
Lele56g0375 284 MobiDBLite consensus disorder prediction 1 23 - -
Lele56g0375 284 ProSiteProfiles Myb-like domain profile. 11 61 IPR001005 -
Lele56g0375 284 Pfam Myb-like DNA-binding domain 16 61 IPR001005 -
Lele56g0375 284 Gene3D - 14 66 - -
Lele56g0375 284 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Lele56g0375 284 PANTHER F14D16.11-RELATED 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0375 Lele-ChrLele56 2831253 2832388 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0375 1 279 MYB Transcription Factor Family AT5G16770 31.339 5.54e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele56g0375 Myb_DNA-binding 3.2e-14 CL0123