Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0373 ATGAGCTCGTCGACTATGGAGGACGAGGCCCCTGACCTGGCGTGCCAGCTTGAACACGTTCAAGGCTTGGTCGATGCTCTAGGCGCAGTTCGTTGGAAACACCACCAGTACGCGGTGGTGGAGTTGTCTGAACACGGCATCGTTTTGACTGTGGAAGAAAGCGGTTGTCTTCAGGCCAAGTTAAATTCGATTGGCATTCAGTATCCCCCCCCCCCCCCATTTGCTGATGCAGTATACCTAATTGTTAGGGAATTTGAGTTTGAATGTGTCTGTACTTGTAGCTTGGGCCTTCTAGTGGATTGTTTAAACGTATTCTGGGTTCCTGGTCAATCAAGCATGATTGATATTCAATACCCTGGTCTTGACATGCAGTTTCTTCTGAAGAAAGTTGATTCGCAGGATGCTAGCATTTATGCAGAGATCAGGACAAGGATTCCTGACACAATGCCATGGGACTACAACTTTGAACCTGCTGGAACAAATCCTCTGACCTTTACTGTTAAGGAAGCTATTGAGGATCTAGAGTGGCCTGGTTCTAGCTTCCAGATCATTCTACAGCCAGATCCCCCTTCCGTTACCTTAAAAGGTGAAGGCCATGGAGACTTGCAGATAGATCTTACGTATTATGCAAATACTGACCTCTTGGCAGCATTTCACTGTGATCATCGGGTTTCTTACAAGTACAAATACAAGTTCCTCAGAGCAACAACAACTAACATGCCAAGCAGTGTTATCAAAGAAAACAGAGCAAGCAAGTTAACCATAGGGCGAGGTCGAACAACTGTAATAGTAGCGCACAGACTTTCTACAATCAGAAACGCAGATATGATGGCCGATGTTCAAGGTGGGAAGATTGTTGAAACTGGCTGCCATGATGAGCTCATTGCCCATCCGAATAGTGCATATGCATCTCTTTTTCAACTCCAACAGGCAGCTTCTTTGCAAGGACACCCTTCGGTGGGTCCTAGCTTGGGAAGGCCGTCAAGGGTAAGGTCAAGAGAATTATCCCGTACAACGACTAGCTTAGGTAGCAGTTTTCGATCAGATAAAGAATCTATCGGTCGTGTTGATGCTGATGAAGTGGATAGTATTAGAAAGACAAGGCATGTTTCCACACACAGATTATACTCCATGATAGGACCTGATTGGTACTATGGGGTTATAGGGACTTTATGTGCATTTATTGCTGGAGCCCAGATGCCTCTTTTTGCTCTAGGAATAGCTCATGCTCTGGTATCATATTACGTGGACTGGGAGACTACCTGTGGTGAGGTCAAGAAAATTGCTTTCCTCTTTTGTGGGGCAGCAGTTGTAACCGTCATTGTCCATGCCATTGAACACCTTCGTTTTGGAATCATGGGTGGGCGACTTACTCTTCGTGTCCGAGAAGCTTTGGTTTCTGGTAAGTGCGATCAACTTATCAATGCTTTGCCTGCTTCTGTTTTGAAGAATGAAATTGACTGGTTCGATGATACAGACAACACAAGTTCTATGCTTTCATCACGTCTAGAGACTGATGCAACTTTGTTGCGAACTATAGCTGTTGATCGGTCTACAATTCTCTTACAGAATGTTGGTCTGGTCGTTGCTTCATTTATCATTGCCTTCTTGTTGAACTGGAGAATAACGCTTGTTGTCATAGCCACTTATCCTTTGATCATCAGTGAAGTGAACTTTATGCTATTGAGCTTGTTGATCCTTCCAAGCGTTCGTTTAGAAGGGGTCAAATTGCAAGAATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTAGGAACTGGCCTTTAGCTTCATTCTCTTGCAGTTGCACCTCCAAATGTTATGCTTTCGAGCTTAGATTTGCTTCACCTCTACAGTGGGTGAGCGGGGAATTCAGCTATCTGGTGGCCAAAGACAGAATCTTGCTTCTTGATGAAGCCACAAGTGCACTGGCTGTGGAATCAGAGCTTGTGGTTCAGCAAGCGCTAGACAGATTGATGCAGAACAGAACAACATTAATGGTGGCACATAGATTATCCACAATGAGAAATGCAGATGAAATATTACTTTTGCAGGATAGGAAGATAGTGGAGCAGGGGTCTCGTTCAAGTCTTATAGAGAACAAAAATGGAGCATACTATAAATTAGTCAGCCGTCAACAGGAACAGAATCAACAATAA 2181 0.442 MSSSTMEDEAPDLACQLEHVQGLVDALGAVRWKHHQYAVVELSEHGIVLTVEESGCLQAKLNSIGIQYPPPPPFADAVYLIVREFEFECVCTCSLGLLVDCLNVFWVPGQSSMIDIQYPGLDMQFLLKKVDSQDASIYAEIRTRIPDTMPWDYNFEPAGTNPLTFTVKEAIEDLEWPGSSFQIILQPDPPSVTLKGEGHGDLQIDLTYYANTDLLAAFHCDHRVSYKYKYKFLRATTTNMPSSVIKENRASKLTIGRGRTTVIVAHRLSTIRNADMMADVQGGKIVETGCHDELIAHPNSAYASLFQLQQAASLQGHPSVGPSLGRPSRVRSRELSRTTTSLGSSFRSDKESIGRVDADEVDSIRKTRHVSTHRLYSMIGPDWYYGVIGTLCAFIAGAQMPLFALGIAHALVSYYVDWETTCGEVKKIAFLFCGAAVVTVIVHAIEHLRFGIMGGRLTLRVREALVSGKCDQLINALPASVLKNEIDWFDDTDNTSSMLSSRLETDATLLRTIAVDRSTILLQNVGLVVASFIIAFLLNWRITLVVIATYPLIISEVNFMLLSLLILPSVRLEGVKLQEYSMAFPSSLFSHLMALPCGRNWPLASFSCSCTSKCYAFELRFASPLQWVSGEFSYLVAKDRILLLDEATSALAVESELVVQQALDRLMQNRTTLMVAHRLSTMRNADEILLLQDRKIVEQGSRSSLIENKNGAYYKLVSRQQEQNQQ 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0373 726 PANTHER ABC TRANSPORTER B FAMILY 359 555 - -
Lele56g0373 726 Pfam Repair protein Rad1/Rec1/Rad17 15 243 IPR003021 GO:0000077
Lele56g0373 726 Gene3D - 635 721 IPR027417 -
Lele56g0373 726 Pfam ABC transporter transmembrane region 388 554 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele56g0373 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 720 IPR027417 -
Lele56g0373 726 Gene3D - 10 245 - -
Lele56g0373 726 Gene3D - 256 334 IPR027417 -
Lele56g0373 726 FunFam Damaged DNA binding protein 10 288 - -
Lele56g0373 726 MobiDBLite consensus disorder prediction 316 347 - -
Lele56g0373 726 SUPERFAMILY ABC transporter transmembrane region 373 556 IPR036640 GO:0005524|GO:0016020
Lele56g0373 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 309 IPR027417 -
Lele56g0373 726 Gene3D ABC transporter type 1, transmembrane domain 335 555 IPR036640 GO:0005524|GO:0016020
Lele56g0373 726 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 387 554 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0373 Lele-ChrLele56 2816178 2822171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0373 635 726 Calmodulin-binding Proteins AT2G36910 50.538 5.60e-18 87.0