Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0372 ATGCATCTACTTTCATGTTTGAATAAACTGGCTGAAAAGTTTTGCTTTTTCATTGAACATGTGATTTACCTCCTTCCTAACTCTTTTTCTATTGTCGACATAATTAAACAGGGTTTCAGGAAGGTCGATCCAGATCGATGGGAATTTGCTAATGAGGGCTTTTTGAGGGGTCAGAAGCACTTGCTTAAGAACATAACCCGGCGAAAACCTGCCCATGGTCTTAGTCATCAACAGGCACAACAATCTCATGGGCAGAGTTCATCTGTAGGGCCATGTGTAGAGGTTGGGAAGTTTGGTCTAGAGGAAGAGGTTGAAAGACTCAAAAGAGACAAGAATGTGCTCATGCAGGAGCTTGTGAGGTTGAGACAGCAGCAACAGGTCACTGATAACCAGATGCAACAAATGGTTCAGCGCCTTCAGGGAATGGAACAACGTCAGCAGCAATTGATGTCATTCCTTGCAAAGGCTGTCCAGAGTCCTGGCTTCTTGACTCAGTTCGTACAACAGCAAAATGAGAGCAATAGGCGCATAACTGAAGCCAACAAAAAACGAAGGCTTAAGCAGGAAGGTATTTCTGAAACAGAGTGTGCTACTGCTTCTGATGGACAAATTGTTAAGTATCAACCTTTGATGAATGAAGCTGCTAAAGCAATGCTAAGGCAGATCATGAAATTAGATACCCCTTGGCTAGAATCTTTCGATAGTAACTCAGACAATTACTTGATTGACAATGGCTCCACATCGTCAGGGGCAATGGACAGTGGCAGCACTTCAAACCGGAGCTGTGGAGTAACCCTTCAAGAGGTCCCCCCAACTTCAGTGAATGCTCTCTCAGCTGGCAAATCTGAAAAACAATCTTCTCCACAGTCTGCAGCTTCTGAAAAAGTTATGACTGCTCAATACCCTGATGTAAATGTGCTGGTTGGTGCATCTGAGAAACATTCTATCCCTGTTTCTGAGGTAGATCTCATGCCCGAGCCTTCTCCAATACCAGAGATGGCAACGGGAAGTATTCTTGATATTCCTGAAGAGAATTATATGGGACCTGAAACAGGAAATGACGGATTCATGGATCCTAACTTATTGGGGGTAAACGGGGTGATGCCCATTGATATTGGTAGTATTTCACCTGATACAGACATTGATGACTTGTTACGCAACTCTTCTTTTTGGGATGACTTACTGCAAAGTTCACTGCCTGAGGATATCGAGATTGATGCTGCTGATGTCTCCAGGGGAAATGAGGTGCAGCCAGTGGAAAATGGATGGAACAAAGAGCATATGGATCAACTTACAGAGCAGATGGGTCTTCTTTCTTCTAATGCAAAAAGAGTTTGA 1338 0.4365 MHLLSCLNKLAEKFCFFIEHVIYLLPNSFSIVDIIKQGFRKVDPDRWEFANEGFLRGQKHLLKNITRRKPAHGLSHQQAQQSHGQSSSVGPCVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQVTDNQMQQMVQRLQGMEQRQQQLMSFLAKAVQSPGFLTQFVQQQNESNRRITEANKKRRLKQEGISETECATASDGQIVKYQPLMNEAAKAMLRQIMKLDTPWLESFDSNSDNYLIDNGSTSSGAMDSGSTSNRSCGVTLQEVPPTSVNALSAGKSEKQSSPQSAASEKVMTAQYPDVNVLVGASEKHSIPVSEVDLMPEPSPIPEMATGSILDIPEENYMGPETGNDGFMDPNLLGVNGVMPIDIGSISPDTDIDDLLRNSSFWDDLLQSSLPEDIEIDAADVSRGNEVQPVENGWNKEHMDQLTEQMGLLSSNAKRV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0372 445 MobiDBLite consensus disorder prediction 247 268 - -
Lele56g0372 445 MobiDBLite consensus disorder prediction 71 89 - -
Lele56g0372 445 SUPERFAMILY "Winged helix" DNA-binding domain 23 68 IPR036390 -
Lele56g0372 445 Coils Coil 97 124 - -
Lele56g0372 445 Gene3D - 18 69 IPR036388 -
Lele56g0372 445 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 38 282 IPR027725 -
Lele56g0372 445 MobiDBLite consensus disorder prediction 69 89 - -
Lele56g0372 445 SMART hsfneu3 1 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0372 Lele-ChrLele56 2812035 2813372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0372 24 439 HSF AT1G32330 48.198 3.31e-116 347