Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0356 ATGATTTGCAGCTTCAGCGAGCTCCAAGAAGAGGCCATGTCGCCTTCCTCCTCGTCTCTGCTGAATCCTCAAGCTCACAAAATCCTCTATCCTCTTCCCATTTTCCCTTATTCTGCTTCTCCCCGGAAATTTTGCTGTTTACAAACTGTAAAGTTTCTAAGGAAGCTTCATTCTCCGCGGCTAGCTTTTCAGTCATCCAGTGAGGTTCATGTTGACGACCTGGAAGAACATGTTATTGGCGACTGTGTCGTCTTCGAAGACGGCATATTCGAAGACCCAGTTCTTCAGGAAGACCCGAACATAGATAATTCCGGCATAGATAATTTGAAACCTAAATCGAAGAAAAATGTCCCAGAGATTGTGCCTGAGAATTTGGTCCCCGACCGGTGGAGAGAAGCTCAGGCGGAGATCAACATCACGAAGAAGGAGAGGCGCAAGATTGCTCAGGAAATTCAATTCAATAGCCGGGTCGATAAGAAGAAACAAGGGATGATTCCCCTGAGGCGTATGAACCTGGAAGACTATAAGGCGTATAAGGAAGCCAAATTGGCTCAGCTGAAGCCCTTGGTTCTCGACAAACCTTCGAGCTTTCCGGTGAAGGAGGAGGTTCCCGTTAGAAAAGAAGTTGATGTGAGTAATGAGTCTGCTTGTGAACGCGTAGTGCCTAAGAATCCTAGGTGGGCAGTTTATGGCCGGGGTTTGGAGGACGTTTCAGAGTTTTTCAGTAGTGAGAATTACGATCCTAGTAAAAAGAATACCGAAGGCCAAGGCCGTCGTAAGTTATTTACGAAGGAGGAGAAGGTTTTATTGAGTAAGCGGATACCAGATTTGGCGTCTGCAACTTCTGAGAAATGGCTGCCTCTGCACACTCTTGCTGCATGTGGAGAATTTTACCTTGCAGATTCTTTGTTGAAACATAATGTCGATATCAATGCTGTTGATAAGGATGGCTTGACTGCTCTTCACAAGGCCATAATTGGTAAAAAGCAGGCCATAACGAACTACCTTCTGAGGAATTCAGCTAATCCATTCATACTTGATAAAGAGGGGGCAACCTTGATGCACTATGCTGTACAGACAGCTTCCAGCCAGGCGATTAAAATCCTTCTACTATATAATGTTGATATAAATCTTCAGGACAATGATGGGTGGACACCCTTACATGTTGCCGTTCAAGCCCGAAGAACCGATGTAGTGAGGCTTCTACTTGTTAAGGGTGCTGATAAGACAATAAAAAACAGGGATGGTTTAACTCCACTTGAACTTTGCCTTCATTCCGGTCAAGACTTGAGGACATATGAGCTAATCAAGCTGTTGAAGCAACTTCCAAGGCGTTAG 1338 0.4499 MICSFSELQEEAMSPSSSSLLNPQAHKILYPLPIFPYSASPRKFCCLQTVKFLRKLHSPRLAFQSSSEVHVDDLEEHVIGDCVVFEDGIFEDPVLQEDPNIDNSGIDNLKPKSKKNVPEIVPENLVPDRWREAQAEINITKKERRKIAQEIQFNSRVDKKKQGMIPLRRMNLEDYKAYKEAKLAQLKPLVLDKPSSFPVKEEVPVRKEVDVSNESACERVVPKNPRWAVYGRGLEDVSEFFSSENYDPSKKNTEGQGRRKLFTKEEKVLLSKRIPDLASATSEKWLPLHTLAACGEFYLADSLLKHNVDINAVDKDGLTALHKAIIGKKQAITNYLLRNSANPFILDKEGATLMHYAVQTASSQAIKILLLYNVDINLQDNDGWTPLHVAVQARRTDVVRLLLVKGADKTIKNRDGLTPLELCLHSGQDLRTYELIKLLKQLPRR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0356 445 Pfam Ankyrin repeats (many copies) 287 329 IPR002110 GO:0005515
Lele56g0356 445 ProSiteProfiles Ankyrin repeat profile. 316 348 IPR002110 GO:0005515
Lele56g0356 445 FunFam Ankyrin repeat domain-containing protein, chloroplastic 256 353 - -
Lele56g0356 445 ProSiteProfiles Ankyrin repeat profile. 283 315 IPR002110 GO:0005515
Lele56g0356 445 Gene3D - 357 442 IPR036770 -
Lele56g0356 445 ProSiteProfiles Ankyrin repeat region circular profile. 349 381 - -
Lele56g0356 445 ProSiteProfiles Ankyrin repeat profile. 382 414 IPR002110 GO:0005515
Lele56g0356 445 SUPERFAMILY Ankyrin repeat 275 428 IPR036770 -
Lele56g0356 445 Pfam Ankyrin repeats (3 copies) 332 413 IPR002110 GO:0005515
Lele56g0356 445 ProSiteProfiles Ankyrin repeat region circular profile. 382 414 - -
Lele56g0356 445 Gene3D - 235 356 IPR036770 -
Lele56g0356 445 SMART ANK_2a 349 378 IPR002110 GO:0005515
Lele56g0356 445 SMART ANK_2a 316 345 IPR002110 GO:0005515
Lele56g0356 445 SMART ANK_2a 382 411 IPR002110 GO:0005515
Lele56g0356 445 SMART ANK_2a 283 312 IPR002110 GO:0005515
Lele56g0356 445 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 208 440 - -
Lele56g0356 445 FunFam Ankyrin repeat domain-containing protein, chloroplastic 354 445 - -
Lele56g0356 445 ProSiteProfiles Ankyrin repeat profile. 349 381 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0356 Lele-ChrLele56 2692992 2695399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0356 336 433 Ion Channels AT2G25600 30.693 1.96e-07 51.6