Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0353 ATGAAGGAAGAAGCAGAGCAAGAAAAAGAAGCTCTCCGTCTCAAAGCCATGGCTGAATCCAAATACAAAAGCTCCAACCTCAGCTCTGCTTTGAAATATGCCAAGCGAGCCCAACGGCTTGTTCCTGACCTCGATGGTATCTCCGAAATGGTCACTTCCTTAGACATTCTCGGTGTGGCCTCCAAATCGCCTACTCCTGACTGGTACAAGATACTCCAGGTTGAGCCCTTTGCTCATCCTAACGTCATTCGGAAGCAGTACAAGAAGCTAGCTTTGACTCTTCACCCGGACAAGAATCCCCATGTGGCTTCAGAGGAGGCGTTCAAGCTCGTCAGTGAGGCGTTCCGATTTCTTTCTGATAAAATTCGGAGGAAGGAGTACGATATGAAGATGAGGATTCGGATTCAGGATGAGGCGACAGAGGGTTCGAAGCAGCAGTTGGAGACCTTCTGGACAGCATGCTCCACCTGTCGGCTTATGCATCAGTTTGAGAGGAAGTATGTGGGTCATAATTTGGTGTGCCCTAGTTGTAAAAAGAGTTTTAAGGCTGTGGAGGTTGAGGATGGTAACGAGTCTGCGGAGGAGGAGGAGGAGATGAGGGTTAGGAATAGAAGTAGGAAGTTGAGAGTTGCGAGCTTGAGGAAGAAAGTTGGTACTTTTGGGAAATCACGGACCGTGAATGGGAAAGTGAGCAGTGAAGAGGTTGAACCTGTGACCACCAAGAGTGGTAGACTAAAGGATAAAGGTGGAGGCCTTCAAGTGAGAAATGGGAAATTAGAGAGTGAAGGAGCTGTTGGTAAATGGAGTGGCGGAAGACTGAGAAGTGGAGGCTTGAGGAGGAGAATGAGCACTGTTGGGGATGTGTTGGAAAGGTCCAAACCAAAGAAAATTAGAACTCGTGAGGAAACGATGACATTGGCGGAAATGCAGTCTGAAATCAAGAAAAAGTCTCAGCAAAAGAGGAAGATGACGTTGAAGCTAAAGGATAAGGAGGGGGATAAAACAGAGAAGAGGAAAGAGCAGGGTGAATTACAAAAGGCTTTAAAAAGTTCTATGAGTTTAGTGCCTGTCAAATCAAGAAGCTTGAAGAGCGGGAAGCCAGTAGTTGAGGAGAAGCAAGCATCTCTTGCTAACAGTAACTCTAGCGGAGGGGACATGGAAAATATGGCAGTGGAGGATTCAGATTTTTATGATTTTGATAAGGATAGAGTAGAGAGAAGTTTTAAGAAAGGCCAGGTGTGGGCTGTATATGATGATGATGATGGAATGCCAAGGAATTATGCTTTGATTGATGAAGTGGTATCAGTAAATCCTTTTGAGGTAAGCATAAGTTGGCTAGATCTACAGAACAGTGGGGATGAAAAGATAATTAGTTGGGAGAAAAGGGGGTTTCGTATATCTTGTGGGAGATTTAAAATTGCCAGGAAGACTTCCATAAATTCTGTAAATATCTTTTCCCATGTTGTAGATTGTGAACGGGCAGCTCGTGAAGTTTACATAATTTATCCAAAGAAGGGGTCTGTGTGGGCACTTTATAATGAGGCCGCACCTGGTGTAGAGGGAAGAAGTGTTGCAGTTCAGAGCAAGAGGTGCTATGATATCGTTGTATTTTTGACGAGTTATAGTGAGATAACTGGATTAAGCATGGCATATCTGGGGAAAGTCAAAGGTTACAAGACAATATTCAAGAGACAAGAAATGGGGAGTCATGCGATTAGATTTCTTGAAAGAGATGATTTCTGGTCAGTTTCACATCAAATTCCTGCACGGAAACTTTCTGGAATTGAAGCTCCTGAACTTCTGAGAAACTCTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTGGGCTTAATTAG 1863 0.4412 MKEEAEQEKEALRLKAMAESKYKSSNLSSALKYAKRAQRLVPDLDGISEMVTSLDILGVASKSPTPDWYKILQVEPFAHPNVIRKQYKKLALTLHPDKNPHVASEEAFKLVSEAFRFLSDKIRRKEYDMKMRIRIQDEATEGSKQQLETFWTACSTCRLMHQFERKYVGHNLVCPSCKKSFKAVEVEDGNESAEEEEEMRVRNRSRKLRVASLRKKVGTFGKSRTVNGKVSSEEVEPVTTKSGRLKDKGGGLQVRNGKLESEGAVGKWSGGRLRSGGLRRRMSTVGDVLERSKPKKIRTREETMTLAEMQSEIKKKSQQKRKMTLKLKDKEGDKTEKRKEQGELQKALKSSMSLVPVKSRSLKSGKPVVEEKQASLANSNSSGGDMENMAVEDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDEVVSVNPFEVSISWLDLQNSGDEKIISWEKRGFRISCGRFKIARKTSINSVNIFSHVVDCERAAREVYIIYPKKGSVWALYNEAAPGVEGRSVAVQSKRCYDIVVFLTSYSEITGLSMAYLGKVKGYKTIFKRQEMGSHAIRFLERDDFWSVSHQIPARKLSGIEAPELLRNSWELDPASLPSDLLGLN 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0353 620 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele56g0353 620 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele56g0353 620 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele56g0353 620 PANTHER BNAC03G44070D PROTEIN 7 613 - -
Lele56g0353 620 MobiDBLite consensus disorder prediction 305 387 - -
Lele56g0353 620 MobiDBLite consensus disorder prediction 224 255 - -
Lele56g0353 620 CDD DnaJ 67 120 IPR001623 -
Lele56g0353 620 MobiDBLite consensus disorder prediction 305 345 - -
Lele56g0353 620 Pfam Domain of unknown function (DUF3444) 387 594 IPR024593 -
Lele56g0353 620 MobiDBLite consensus disorder prediction 224 238 - -
Lele56g0353 620 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele56g0353 620 Coils Coil 306 326 - -
Lele56g0353 620 Pfam DnaJ domain 67 128 IPR001623 -
Lele56g0353 620 SMART dnaj_3 66 123 IPR001623 -
Lele56g0353 620 Gene3D DnaJ domain 58 157 IPR036869 -
Lele56g0353 620 SUPERFAMILY Chaperone J-domain 63 153 IPR036869 -
Lele56g0353 620 MobiDBLite consensus disorder prediction 373 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0353 Lele-ChrLele56 2664814 2666676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0353 1 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.902 1.32e-27 112