LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele56g0351	ATGGATTCCATTGAACCCATCAGATTTCAATTACATGGATGGTTTAGTGCAAAATTTCGTAAGGACCTTGAGTTCAAATCGGGGGGAAGGCGGGATTCTTTGAAAGCTGACGCATCTCAAGATGGAGTGTATGCTCCTCAAAATGGGGGAATTAATATACATGATAGAGGGGTTAATCAACCTATGCCTATCTCTGTTGCTGGTGCTCCTGGAGCAGTTCCTGGTCTCACCACAAATTTAAATATAGGAAAGGATTATTGGGGAGCCCCAACTTCAACTATTCCTGTGGTACATGGAAAGGTTGCCTCTACTGCAGTTGCTAAGGGGATGGTTACTACTGGATCACAGGATGGTGTTCAGCCACAACTATTGTTACAGGATGAAAGAGCGCTTAAAAGACAGAGGCGGAAGCAATCTAATAGGGAATCTGCTCGTAGATCTAGGTTTCGCAAGCAGGCTGAGTGTGAGGAACTAGCCGAGCGAGCTGATGGTCTGAAAGAAGAATATGCCTCACTCCGTTCAGAAGTGAGTCGAATCAGGAGCGAGTGTTTGCTCTCAGAGAATGCTGCCCTCAAGGGGATGTTGAAATCTTGA	594	0.4562	MDSIEPIRFQLHGWFSAKFRKDLEFKSGGRRDSLKADASQDGVYAPQNGGINIHDRGVNQPMPISVAGAPGAVPGLTTNLNIGKDYWGAPTSTIPVVHGKVASTAVAKGMVTTGSQDGVQPQLLLQDERALKRQRRKQSNRESARRSRFRKQAECEELAERADGLKEEYASLRSEVSRIRSECLLSENAALKGMLKS	197

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele56g0351	197	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	130	182	IPR004827	GO:0003700\|GO:0006355
	Lele56g0351	197	Coils	Coil	148	182	-	-
	Lele56g0351	197	MobiDBLite	consensus disorder prediction	133	153	-	-
	Lele56g0351	197	SUPERFAMILY	Leucine zipper domain	131	184	IPR046347	GO:0003700\|GO:0006355
	Lele56g0351	197	CDD	bZIP_plant_GBF1	133	183	IPR045314	GO:0003700\|GO:0006355
	Lele56g0351	197	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	135	150	IPR004827	GO:0003700\|GO:0006355
	Lele56g0351	197	Pfam	bZIP transcription factor	128	183	IPR004827	GO:0003700\|GO:0006355
	Lele56g0351	197	SMART	brlzneu	128	197	IPR004827	GO:0003700\|GO:0006355
	Lele56g0351	197	Pfam	Disordered region downstream of MFMR	23	94	-	-
	Lele56g0351	197	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	27	195	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Lele56g0351	197	Gene3D	-	131	184	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele56g0351	Lele-ChrLele56	2655094	2659222	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele56g0351	38	195	bZIP Transcription Factor Family	AT2G35530	57.669	2.50e-47	158

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele56g0351		MFMR_assoc	4.2e-12	No_clan