Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0350 ATGGGTTACGAAAACGATCCGTATCGCGATGAGGATGGAGAACCATTGATGGACTATGATGACGTGCAATCCGATCGCGAGCTCTCTCCTGAACCCCAACAGCAAGGACTTTTCGACGGTTTGGAGGAAGACGTCGATGATTGGCGTGGGCGAGAACGATCGCAAACTCCGGTATACGATAATGATTCGTCCATGTCAAAGGCGAAGCCTAGGAAGAGGCTTATCAAGAAAATTGACGCTGGGAGCCAGTCTGTGGCTCCGGAGCTTGCTGATGAGGATGAGGAAGCGTATCCGGCAAGTTTTGTGAGGGACGGGTCTGAGGAGGGGGAAGGAAGAAAGAGGAAGGGGAAGGATGGTGGCAGTGGGAAGAAGGAGAAGAGGGACAAGGGGGAGAGGAGGTTAGGTAGTAGTAATAAAGGTGGCTCAAAATCTGGGTTATCGAAGAAAGGGTTTGCGGCTAAGGCAGGAAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATTGCTGGCGGGGACTCTGAGGATGACCAGGAGGGCGTCAGGACAGTCGATGATGATAATTTCATAGATGACACTGGAGTGGAGCCTGCTTTATACGGTAGTGATAATGAAGCTCGTTCTCCTGGTCGATATGCCCAGGCAGAGGAAGGTGAGGAGGATGATGAGATCAAGGAACTTTTTAAGATGGGTAAGAAGAAGAAGAAGAATGAGAGAAGTCCTGCAGAGATAGCTTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAAGAAGATGCTGAATTCAATAGACAGGGGAAGCCTGCAATAAATAAGCTGAAGAAGTTGCCTCTTTTAACTGAAGTCCTCTCAAAGAAACAACTTCAACAGGAGTTTTTAGATCATGGGGTGTTAACTTTATTGAAGAATTGGCTTGAACCCCTCCCAGATGGAAGCTTACCAAACATAAACATCCGCACAGCAATTTTGAATATTTTGAATGATTTTCCTATAGACCTTGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTCGGAAAGGTCATTATGTTTTTGTCAAAATCTGATGAAGAAATCAATGTAAATAGGAAACTAGCCAAGGAGCTGGTTGATAAATGGAGCCGACCTATATTTAACAAGAGTACAAGATTTGAAGACATGAGAAATGTGGAGGATGACAGGATTCCTTTCAGAAGGCCATCAGTGAAGAAGCCTGCAAATAAAGCTTCAGGAATCGAATCTAGAGATGGGGATCTTGATTTGGAATTTTCACAGAGGAAGTCTGGACAATCCTCTACCAGACAACTCACAACTAGGCCAGAAGCAACACCGTTGGATTTTGTGGTGCGACCCCCATCTAAAGTTGACCCAGAAGAAGTTAGGGCCCGTGCAAAACAAGCTGCACAAGATCAGTACCGTATGAAGATGAATAAGAAGCTACAGCAATTGAGGGCACCCAAAAAGAGGCAGCTTCAAGCTACTAAGTTGAGTGTCGAAGGTCGGGGTATGACAAAGTATTTGTAA 1542 0.4559 MGYENDPYRDEDGEPLMDYDDVQSDRELSPEPQQQGLFDGLEEDVDDWRGRERSQTPVYDNDSSMSKAKPRKRLIKKIDAGSQSVAPELADEDEEAYPASFVRDGSEEGEGRKRKGKDGGSGKKEKRDKGERRLGSSNKGGSKSGLSKKGFAAKAGKDHDGDVKEMWDTIAGGDSEDDQEGVRTVDDDNFIDDTGVEPALYGSDNEARSPGRYAQAEEGEEDDEIKELFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAEFNRQGKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINVNRKLAKELVDKWSRPIFNKSTRFEDMRNVEDDRIPFRRPSVKKPANKASGIESRDGDLDLEFSQRKSGQSSTRQLTTRPEATPLDFVVRPPSKVDPEEVRARAKQAAQDQYRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMTKYL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0350 513 MobiDBLite consensus disorder prediction 152 190 - -
Lele56g0350 513 PANTHER PROTEIN IWS1 HOMOLOG 1 1 513 IPR044204 GO:0009742|GO:0032784
Lele56g0350 513 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 296 386 IPR035441 -
Lele56g0350 513 Pfam TFIIS helical bundle-like domain 329 383 IPR017923 -
Lele56g0350 513 MobiDBLite consensus disorder prediction 42 56 - -
Lele56g0350 513 MobiDBLite consensus disorder prediction 96 136 - -
Lele56g0350 513 MobiDBLite consensus disorder prediction 402 425 - -
Lele56g0350 513 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 242 389 IPR035441 -
Lele56g0350 513 ProSiteProfiles TFIIS N-terminal domain profile. 303 386 IPR017923 -
Lele56g0350 513 MobiDBLite consensus disorder prediction 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0350 Lele-ChrLele56 2650308 2653388 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele56g0350 Med26 3.2e-13 No_clan