Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0334 ATGGCTGTTGAGCATGATTTGGGAGGCCGAGAGTCTCGCCAGAAGGCTGAAACACTTGGCAGCGACATACTTTTCTGGTTCACCCAATGTAGAGAGCCTCTGTATATTGATGACTTGGACCAAATGCTCTATGATGGTATGCTTTCTCTCAACTTGGAGATGCAGAATGGCAGTGTTGAGGAGAGCTTCAACTTATTTTTATTTCATGATATTGCCAATGTTGAAGAGGTGGCTGAGAAACTGATGATTCTGCATGAAGAATGTCTTGAAGGTAATTTTAAGTCCATTGAGAAACTAAGGGAAGCCAATCTTAATCAATCTGCTCGCCCTCGTGCAATGCAGGTTGTGAATAATGGTGAGGACGATGAAGATGACAGCAGTGATGACGAAGATGGAGCTAGTGGTAATTCTAATGTGGGGGTAGGAATGCAAATGCCAGTTCAGGAGTCCATACCTAAGGCTGCAGCTGAAGTAGACGACGAGGGATGGATTTTAGTCTCAAACAGACGGGATAGGAACTCTTATCCCGGAAGTTGCAGGGGCATGGTCTGTGGTACAAATTACAATCTCGATGAAGCTGGTGTTGCTGCGCTCGCCCATGATGATCGTGTTCCAGCTACTGTGATAACTGGTTTTCTTGGTTCTGGAAAGACGACTCTCCTAAATCATATTCTGACGTCCCAACATGGCAAGCGGATAGCTGTCATTGAAATCGAGTTTGGTGGGGTGGATATTGACGGTTCATTGGTTGCTAGTCATTCTTCTGTTAGTGAAGCCATTGTCATGGTTACTAATGGCTGCCTATGCTGCACTGTACGTGGGGATCTATTTAAAATGCTGTTGGAACTGGCTAGAAAAAAACGAGATCAGCTTGATCATATTGTTATAGAAACCACAGGTCTTGCCAAGCCAGCTCCTGTTATCCAAACATTTTGCAGTGATGAACTGGTTTCTCGGTATGTGAAACTCAATGGAATTGTGACTTTGGTTGACTCCAAACATGCCATGCAGCATTTAAATGAACTGAAACCAAGGTTTGTTGTTAATGAGGCAGTGGAACAAGTTGCATATGCAGACCGTATTATTTTTAACAAGATAGATTTAGTGACTGAGTCTGAGTTGGAAGTTTTGACCAAGAAAATTAAGAAACTAGAAAGTTCAGTTGTTCATAGAAATGGAATGTGCTTATCTCATAAAATATTGTTGTGCCAGCATATCAATGGGATGACACAAATTAAGCAAGCTAAATTTGGATCTGTTGACATGGGCTTTGTTTTGGGTCTGGGAGGATATGATCTTGAGAGAATTGAATCTGAGGTTCGTGGAGATTGTTTATCTTCTTCAAGTGATTATCATGACACTGTGCATGAACACAACGAACAGCATCATCATCATGACCAAAAGCATGATTCTGCTGTCTCCAGTGTCAGCATTGTTTCTGAAGGAACCCTTGATCTTGATGAGCTCAAGAGATTGATAGAAGAAAAAGGAGAGGATTTATACAGAATGAAAGGGGTCTTGTCAGTGGATGGCTCTGATCAAAGATATGCATTACAGAATTCTGTGAGTGATATTACGGTTCCTGGGTTTTCTGATCACCTCGTTCATGTGTTGCTTTTGGAACCTAACGATCGAATGGAGACACTGGGATATGAAGGAGGAGGGAATTTTGGGTTTGAGAATGCGGTCGTGATGACCAGAGATCCGAAGCCAAGGCTCAGATGGACGGCTGATCTTCATGATCGATTTGTCGATGCCGTCACCAAGCTTGGTGGCCCCGACACTGAGGAAAGGAAACCTGAAATTTGTAATGAAACTACCAAACTACTCCATGAAGCTTTTGAGCTCTGGAATTTTCAAACTCTGTTCAAATTTGGCTTAGTGCACCAAAAAAGCGACTCCCAAGTCTGTGTTGAGACTGATGGGCTTGAAAGGCTTGACTTTGTATCATTTGAAGAGTCATTTACAGGTGCACATGTACATTTTAGTGATCGTTCTTCGGGGTCTAACACCAATTACAGAGGCAATAACCAAACAGAGGAAATCCCATTAGCAGAGGCACTGAAGCGTGGGATCGAAGTCCAAAAGCAATTGGAACAGCAGCTTGAGGTACAAAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCCATGCTTGATCAAGCACAGAAGAGCTTTTCACTGGACATGACCGGATCAAACAACCTCGAAGCAGCAAGAGCTCAATTGACAGACTTCAACTCTGCTTTGTCCAATTTCACGGAGAATATGAACAGAGACAACAAAGAAAACATCATGGACATGAATGATTTCTACAAGAAAGCTCACAGTTCATCGGCTTTCGGAATTTACCAGGAAGCAGAAGGAGAAGACCACAGGGATCAAAAGCCCAAGGCTGAAGAAGTTTCAATACAGTTTGACTTAAACATCAAAGGTAGCTATGACTTTGTATCAGCAGGTGCAGCTGAAATGGATTCCAAGGTGCTTTCATACAGTGTGTAA 2514 0.4264 MAVEHDLGGRESRQKAETLGSDILFWFTQCREPLYIDDLDQMLYDGMLSLNLEMQNGSVEESFNLFLFHDIANVEEVAEKLMILHEECLEGNFKSIEKLREANLNQSARPRAMQVVNNGEDDEDDSSDDEDGASGNSNVGVGMQMPVQESIPKAAAEVDDEGWILVSNRRDRNSYPGSCRGMVCGTNYNLDEAGVAALAHDDRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIEIEFGGVDIDGSLVASHSSVSEAIVMVTNGCLCCTVRGDLFKMLLELARKKRDQLDHIVIETTGLAKPAPVIQTFCSDELVSRYVKLNGIVTLVDSKHAMQHLNELKPRFVVNEAVEQVAYADRIIFNKIDLVTESELEVLTKKIKKLESSVVHRNGMCLSHKILLCQHINGMTQIKQAKFGSVDMGFVLGLGGYDLERIESEVRGDCLSSSSDYHDTVHEHNEQHHHHDQKHDSAVSSVSIVSEGTLDLDELKRLIEEKGEDLYRMKGVLSVDGSDQRYALQNSVSDITVPGFSDHLVHVLLLEPNDRMETLGYEGGGNFGFENAVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDTEERKPEICNETTKLLHEAFELWNFQTLFKFGLVHQKSDSQVCVETDGLERLDFVSFEESFTGAHVHFSDRSSGSNTNYRGNNQTEEIPLAEALKRGIEVQKQLEQQLEVQKKLQMRIEAQGKYLQAMLDQAQKSFSLDMTGSNNLEAARAQLTDFNSALSNFTENMNRDNKENIMDMNDFYKKAHSSSAFGIYQEAEGEDHRDQKPKAEEVSIQFDLNIKGSYDFVSAGAAEMDSKVLSYSV 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0334 837 Gene3D - 453 536 IPR036627 -
Lele56g0334 837 MobiDBLite consensus disorder prediction 107 144 - -
Lele56g0334 837 Coils Coil 695 715 - -
Lele56g0334 837 Pfam CobW/HypB/UreG, nucleotide-binding domain 205 386 IPR003495 -
Lele56g0334 837 PANTHER COBW-RELATED 199 526 - -
Lele56g0334 837 Coils Coil 740 760 - -
Lele56g0334 837 Pfam Cobalamin synthesis protein cobW C-terminal domain 473 528 IPR011629 -
Lele56g0334 837 CDD CobW-like 205 429 - -
Lele56g0334 837 Gene3D - 201 431 IPR027417 -
Lele56g0334 837 Gene3D - 569 622 - -
Lele56g0334 837 Pfam MYB-CC type transfactor, LHEQLE motif 683 729 IPR025756 -
Lele56g0334 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 385 IPR027417 -
Lele56g0334 837 SUPERFAMILY Hypothetical protein YjiA, C-terminal domain 473 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0334 Lele-ChrLele56 2530295 2540328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0334 551 750 G2-like Transcription Factor Family AT4G13640 39.512 9.61e-32 124