Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0324 ATGGTGAGGTTGAAGCATCGGAAGAAAAGGCAATCTGAAACCAGAAGACCGAAACATTTACTTGACTCGGCGTGTGGCTGTGCTGAGTCTCAGAGGGACAAAGAACGAGAAGCAGTTGAGGTTTGCTTGGAAGAAGAACAAAAGGTTGTAAAAGTAAAGATGTTTACATGCATAGCGTGCACAAAGCAATTGGCGAAGGAGAGGGAAGTTGGAGGAGCCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCCCTTAAGTTTTCAGGAGCCTATAAGCAATGCAAACCATGCACAGGATCCAGTAGTTATAATAAAGGGCAGAGACCTTATCCAGATTTTGATACCATCTCTGAAGGAGTGCCATACCCTTATATAGGAGGGGCAAGCTCAAGTTCAATCCCTGCATGGGACTTCATCGGCTCGCATTACCCGGCTGGTAGATCTGACCAGAGATTTGTTGGGCCATTTTCCGGTGACCGAACCCCAAGAGGACACGAATCGGCATCAGCCTGTGATGTGGTGTTGGAAAAAGAGGATGAGCCCAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACATTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTTGATAAATCGCAAGCTCAAAGATGGTGGGGTGAGAATTACGATCGAATCATGGAGCTCTATAATGTCCAGAGATTCAATCGACAAATCAACACTCCTACAAGATCTGAAGACGAGCAAAGAGATTCTTCTTACTCGAGACTGGGGTCCGCAAGAGACAGCCCCATGGGCACATCTTTAAATAAAGAATGGACGCCAAGGAACTATCCTAAAACCCCAGGAAACAACAGAGGGTACTTCCCACCTGAACTTTCGGATCAAGGTGGAGGACCCCATTTCATCGGAGGGTCTTCGTTTGAAGCATCGCGCACGACAACCTCTTCTAGAGATGAACCTTCTGTTAGCAATGGCAGTGACATGGAGGCCGAATGGGTAGAGCAAGATGAGCCCGGAGTTTACATTACTATCAGACAGTTACCGGACGGCACAAGGGAGCTTCGACGTGTCAGATTCAGCCGCGAAAGATTCGGTGAGATACATGCCAAGAATTGGTGGGAGGAGAACAGAGAAAGAATACAAGCTCAATACCTTTGA 1215 0.4774 MVRLKHRKKRQSETRRPKHLLDSACGCAESQRDKEREAVEVCLEEEQKVVKVKMFTCIACTKQLAKEREVGGARESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYNKGQRPYPDFDTISEGVPYPYIGGASSSSIPAWDFIGSHYPAGRSDQRFVGPFSGDRTPRGHESASACDVVLEKEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFDKSQAQRWWGENYDRIMELYNVQRFNRQINTPTRSEDEQRDSSYSRLGSARDSPMGTSLNKEWTPRNYPKTPGNNRGYFPPELSDQGGGPHFIGGSSFEASRTTTSSRDEPSVSNGSDMEAEWVEQDEPGVYITIRQLPDGTRELRRVRFSRERFGEIHAKNWWEENRERIQAQYL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0324 404 MobiDBLite consensus disorder prediction 258 351 - -
Lele56g0324 404 MobiDBLite consensus disorder prediction 325 342 - -
Lele56g0324 404 MobiDBLite consensus disorder prediction 274 299 - -
Lele56g0324 404 MobiDBLite consensus disorder prediction 259 273 - -
Lele56g0324 404 ProSiteProfiles BRX domain profile. 349 404 IPR013591 -
Lele56g0324 404 ProSiteProfiles BRX domain profile. 194 249 IPR013591 -
Lele56g0324 404 PANTHER PROTEIN BREVIS RADIX-LIKE 1 54 404 IPR044532 -
Lele56g0324 404 Pfam Transcription factor BRX N-terminal domain 75 109 IPR027988 -
Lele56g0324 404 Pfam Transcription factor regulating root and shoot growth via Pin3 194 248 IPR013591 -
Lele56g0324 404 Pfam Transcription factor regulating root and shoot growth via Pin3 348 403 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0324 Lele-ChrLele56 2465880 2471472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0324 53 404 Major Intrinsic Protein MIP AT1G31880 66.480 1.20e-160 454