Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0317 ATGATGGAGAAGAGCGAGAATGGGAGGCCGTCAGGTGGTCGAGAGTTCTATGCAAATGGAAATCGCATGAATACTGAAGAAGTTGAAGCCAAACTTACCCAAGGAGATGTTGAAGCCGCTGAATCTGCATTGAAAGAGGGATTATCTATCACTTCCGAGGAAGCAAGAAGTCTTATAGGGAAGCTAGAGTATCAAAGAGGAAATTATGCAAGTGCTCTTCGTGTGTTTGATGGGGTTGATCTCCAAGCTGCCCTTCAGCAATTACAATCTTTAGTTTCTGACATATCAGCGGCCAAGAAAGCAGGCGAGGCACCTACCTCAATCCCTAGGCATGCTGCTAGTTTGATGCTTGAATCCATCTACTTCAAAGCAAAAACTCTACGAAAGCAGGGGAAAATAGCTGAAGCTACCACTGAATGCAAAAATGTGCATGAGGGTATTGAGAAGACATTCAGTCAGGGTGTATCTGATATTCAATTGGACTACACATTGCAAGAAGTAGTCAGTGGCATTGTAGGACTTCTTCCAGAGCTTACCAAGCAAGCGGGTAGCTATCAAGAGGCATTGTCTGCTTATAGGCGTGCTCTCCAACTTCTGACTCAATGGAACATTGATACTGATGGCTGTGCTAGAGTTCAGAAAGGACTTGCAAAGCTTTTGCTGTACGGTGGGTTCGAGGCTAGCCCACCCAAGGCGACTGATCAGGGCGAGGGGTTTTATGTGCCTAAAAACAATCTGGAAGAGGCAATTCTGCTTCTAATGCTTGCCGTGAGGAGACTTTGTGTTGACAAGTCCAAATGGGATCCTTCAGTGATGGAGCACCTGACTTTTGCACTTTCTGTATGTGGCCAAACTTCTGTTCTAGCAAAGCAACTTGAAGAGTTAATGCCTGGATTATATCATCGCATTGATCGTTGGAATCTTTTAGCTTTATGTCTCTATGGAGTAGGACAAAACCAAAGTGCTTTGGATCTATTTAGGAAATCTTTGCACAAACATGAGAGACCAAATGATGTTGAATCATTGTTAGTAGCTGCCAGGATCTGCAGTGAGGATCCTTATCTTGCTGTTGAGGGAGTAGGGTATGCACAAAGGGGAGTCAATAATGCTAAGGGCATAAAAGAGCATTTAAAAGGTGCGTGTCTTAGAATGTTGGGAATTTGTCTGGGAAAGCAAGCTAAGGTTGCTTCCTCGGACTTTCAAAGGTCTAATCTTCAGTCCAAAGCTCTGAAATCATTGGAAGCCGCAATGGGATTTGAGTATAACAATTCTGATCTGATTTTTGAGCTGGGAGTTCATTATGCAGAACACAGAAATTTGACAGCTTCGTTGCGCTATGCGAAGCAGTTCTTTGATGAAACAGGAGGATCCATATTGAAAGGTTGGAGATTGATTGCTCTGGTTTTGTCTGCTCAACAACGATTCCCGGAGGCTGAAGTGGTGATAAATGCTGCTTTAGATGAGACTGCAAGATGGGAGCAGGGGCCACTGCTTAGACTGAAAGCAAAGCTCAAGATTTTCCAATCACAACCAATGGATGCTATTGAAATTTATAGATACCTCCTTGCATTGATTCAGGCTCAAAAGAATTCCTTTGGGCCTGTGAAAATAAATACACAGGTTCAAGATGATGTGAAGGAAATTGATGTTTGGCATGGTCTGGCAAATTTATATGCAAACCTTTCTCATTGGAAGGATGCTGAAGTTTGTTTGCAAAAGGCCAGAGAATTGAAGGGGTACTCAGCAGAGACAGTGCACATTGAAGGCAAGAACAAAACCTCAAGTATTTTGTGTGAAGGACGTGGACAAAAACAAGAAGCTGTTTCTGCTATCACGACAGGACTCCTGTATGGACCATACTATGTTCCAAGCAAGATCCAGATGGGCGTTTTGCTGCTGAAATTGGATTCAAAGTCAAAATCTGTGCCTTTAGCCAGAAGCTTGCTTTCTGATGCACTTCGTTTGGAACCCACTAACCGCACGGCTTGGTTTCACTTGGGAAAAGTTCACAAGTATGATGGCCGAATAGGTGATGCTGCTGACTGCTTCCAAGCAGCTTCCATGCTTGAAGAATCTGATCCTGTCGAAAGTTTCAGCACTTTGCTTTGA 2109 0.4358 MMEKSENGRPSGGREFYANGNRMNTEEVEAKLTQGDVEAAESALKEGLSITSEEARSLIGKLEYQRGNYASALRVFDGVDLQAALQQLQSLVSDISAAKKAGEAPTSIPRHAASLMLESIYFKAKTLRKQGKIAEATTECKNVHEGIEKTFSQGVSDIQLDYTLQEVVSGIVGLLPELTKQAGSYQEALSAYRRALQLLTQWNIDTDGCARVQKGLAKLLLYGGFEASPPKATDQGEGFYVPKNNLEEAILLLMLAVRRLCVDKSKWDPSVMEHLTFALSVCGQTSVLAKQLEELMPGLYHRIDRWNLLALCLYGVGQNQSALDLFRKSLHKHERPNDVESLLVAARICSEDPYLAVEGVGYAQRGVNNAKGIKEHLKGACLRMLGICLGKQAKVASSDFQRSNLQSKALKSLEAAMGFEYNNSDLIFELGVHYAEHRNLTASLRYAKQFFDETGGSILKGWRLIALVLSAQQRFPEAEVVINAALDETARWEQGPLLRLKAKLKIFQSQPMDAIEIYRYLLALIQAQKNSFGPVKINTQVQDDVKEIDVWHGLANLYANLSHWKDAEVCLQKARELKGYSAETVHIEGKNKTSSILCEGRGQKQEAVSAITTGLLYGPYYVPSKIQMGVLLLKLDSKSKSVPLARSLLSDALRLEPTNRTAWFHLGKVHKYDGRIGDAADCFQAASMLEESDPVESFSTLL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0317 702 Gene3D Tetratricopeptide repeat domain 29 339 IPR011990 GO:0005515
Lele56g0317 702 Gene3D Tetratricopeptide repeat domain 392 699 IPR011990 GO:0005515
Lele56g0317 702 MobiDBLite consensus disorder prediction 1 21 - -
Lele56g0317 702 SUPERFAMILY TPR-like 181 690 IPR011990 GO:0005515
Lele56g0317 702 PANTHER PROTEIN NPG1 13 699 IPR043376 -
Lele56g0317 702 Coils Coil 81 101 - -
Lele56g0317 702 SUPERFAMILY TPR-like 407 491 IPR011990 GO:0005515
Lele56g0317 702 SUPERFAMILY TPR-like 497 636 IPR011990 GO:0005515
Lele56g0317 702 SMART tpr_5 459 492 IPR019734 GO:0005515
Lele56g0317 702 SMART tpr_5 660 693 IPR019734 GO:0005515
Lele56g0317 702 SMART tpr_5 548 581 IPR019734 GO:0005515
Lele56g0317 702 SMART tpr_5 303 336 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0317 Lele-ChrLele56 2424013 2427500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0317 5 702 Calmodulin-binding Proteins AT2G43040 61.166 0.0 844