Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0313 ATGCGTTTGTCAGGCCATTCGAGGCGTTCTGGGCGAATAAAGAAGCCCCGTGGGAATCAACAAGAAGCTGGGAAATCTCATTCTTTTAACTCCTGCTTACCCTGGATCGATCGAACCGCCGGCTCGAAGTTTGTCACTATAAGCGCTGGCGTATTACGGAGCATTTTCTTTTCTTCTTTTGGTTTCGGTGATTCTTTTGGAAACAAAACTCGAAAGCATACGAATCTTTTGGGGCGGAGAAATGCTGGGGTTTGGTTTTCTGGGGGAAAGGGGCTCGGAAGGAAGCAAAAATCTGAAGGCCTATCCGACATGGCGTATGATTCCGATAGCCCCTCACAAGATGGGAGGGATGAAGATGATGATGAAGAATATGAGGAGGCTGGCCAGGGCAACCGTTTGCTGGGATTCATGTTTGGAAATGTTGATAATTCTGGTGATCTTGATGTTGATTACCTTGATGAGGATGCAAAGGAGCATCTTTCTGCACTTGCTGACAAGTTGGGTCCTTCCCTAACAGATATAGATTTGTCAGGAAAATCGCCACAAACACCACCTAACATTGTCGAACAAGACTATGGTGAGAAAGCTGAAGGTGCAGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACAGAAGCTGCAAATGAAGAGGATCATTTATTGCCCAAAAAGGATTTTTTTTCTGTTGAAGCCTCTCTTGAAGCTTTGAAATCCAGATCTTCTGTCTTTGATGATGAAAATTATGACGAGGAATCTGAAAATGAGCAAGACTTGGTGAATGGCACTCCTGAAGCTAATAACATCTCTTCAACTGGGGAGCCGGTAGTGTCTCTTGTTGATGCATCTAAAGGAGAGCAAAGTCAAGAACTTGAGTCACATGATGGCTCACAGCAGTCTGAAGAATTGGACACTGACTTGCAAAAACTCCTGGAGGAAGGGCCTGAAGTTTTGAAAGGTTCTACTCCATTGCCTGTTTTATGTGTGGAAGATGGGATGGTCATTTTAAGGTTCTCTGAGATTTTTGGTATTCATGAACCTTTGAGAAAAGGAGGGAGGAGAGAGCAACGACCTTCTATTCCTAGAGATAGATACAAGTCCTTAAATGTATCTGATATCGTTGAAGAGGATGAAGAGGCATTCTTCAGAGGTCCCTCTCACAGTCTTCTACTAAATAAACAGGCTTGTGTAGTTCAAAATGGTATAACAGAAAGCCGTGATGCAGACTTGGATTTATCAAAACTTGGATATCTTCATGGGGCTGCCTCAATGACTGTGAAAGATGGCCCACAACGGAAGGACTCTTGTCTTAGTGCTGAACCAATGAAACAGGATTGCTCAGGCCTTGCTTGGGAAGGGAATTCTCTCTTGTGTGCTGATTTTTATCCCCTTGATCAGCAAGACTGGGAAGATGAAATCATTTGGGGCAATTCCCCTGCTGCAAGTAATAATAATCATGAGAGCTCTGAAATTTCTGGATCTGCATTTGGACCTCTAGGGCGTGATGAAGGAGAAATTGAAAGTGGGATGCAAAATATCCAGTTGGAGCCACCGAAGGAATTGGAAGAAAAAAATCATAGTGTTTTCTTGTGCAGCTCTCCTGTCTCATTAGAGCCTTTTGGTTCAAGGGATTCTTCAGGAGCTAAAGCCAATTCATTGTCAAAGAATCTATTTCATCCCCAACTCTTGAGGTTAGAATCCAGACCTGAATTGGATATCTCTAATCCTGCAGATGACAGGAGGGAGAATATTTCTGAGGAGCATGATCAAAATGGCCTAGTAAAGCATTTCACCAAACTGACATTGCAAAACCAGGATATGATGGAAGGGTCTTGGTTAGACAAGATTATATGGGAGGAGGTCAATAGACCTATTGTGAAACCAAAGCTAATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTCTGGACAGTAAGGGTGGTAGACATCTCCGCCTGCATGCAGGGGCAATGATTTTAACTCGTCCTTTAAAATCAAGCAATGGAGATTCTTCTGAGCAACCTGGGCATGGAAATCAGTATGGATGGCGATCCATTGCTAATGATAAACATTATTCGAACAGGAAAACTTCCCAGCAACTGAAATCAAATTCTAAAAAACGCTCAGCTCATGGTGTAAAAGTTTTTCACTCTCAACCTGCGCTGAAGCTTCAGACAATGAAATTGAAACTAAGCAACAAAGATATTGCCAATTTTCACCGAGCACGAGCTTTATGGTATCCTCATGACAATGAGATGGCTGTCAAAGAACAAGGGAAACTGCCAACACAAGGACCAATGAAAATTATCATGAAGAGCTTGGGTGGCAAGGGGAGTAAACTGCATGTTGATGCTGAAGAAACTCTCTCTTCTGTTAAAGCAAAAGCATCTAAAAAGCTAGATTTCAAACCATTGGAAACAGTGAAAATATTTTATCTTGGGAAGGAACTTGAAGATCAGAAATCACTTGCTGCACAAAATGTTCGACCAAATTCCTTGTTACATCTTGTTCGTACAAAGATACATTTGTGGCCTAGGGCACAAAGGGTTCCTGGTGAGAACAAATCCTTGCGTCCACCTGGGGCATTCAAGAAAAAGTCTGATCTATCTGTTAAAGATGGACATGTTTTTCTAATGGAGTACTGTGAGGAAAGACCTTTATTATTAAGCAATGCTGGAATGGGTGCCAGACTTTGTACGTACTATCAAAAATGTTCTCCAGATGATCAAGGTGGCTCTTTATTACGCAACACAGATAGTAGCCTGGGGCATGTGATTTCACTGGATCCTGCTGATAAATCTCCATTTCTTGGAGATTTAAAACATGGATGCAGTCAGTCATCACTGGAGACAAACATGTATAGGGCACCCATATTTCCTCATAAAGTGCCATTAACCGACTACCTGCTAGTTCGGTCATCGAAGGGAAAGCTATCATTAAGACGGATTGATAAAATTAACGTTGTTGGACAGCAGGAGCCTCTTATGGAGGTACTGTCACCTGGAAGTAAGAATCTTCAGACATATATGATGAACAGGCTACTGGTACACTTGTGCCGGGAATTTCAAGCTGCAGAGAAGCGGCACTTACATCCATACATTCGTGTTGATGGGCTGCTGTCTCAGTTTTCTTACCTATCCGAAGCTTCTATTCGCAAGAAAATTAAGGAATATGCTATTTTACAGAAGGGAACAAATGGACAGTCAATTTTGGTTAAAAAGCGAAATTTTCGCATGTGGTCGGAGGATGAATTGAGAAAAATGTTGACGCCAGAGCTTGTTTGTGCTTATGAAAGCATGCAAGCTGGTCTATACCGTCTAAAACATTTAGGAATTACTGAAACTCATCCTACTAATATATCTTCTGCAATGAGTCGACTTCCTGATGAAGCAATTGCACTGGCTGCCGCATCGCACATTGAGAGGGAGCTGCAAATCACTCCATGGAACCTGAGTAGCAATTTTGTTGCCTGCACAAGCCAGGGGAAGGAAAATATTGAGCGAATGGAAATTACTGGTGTTGGTGACCCATCTGGGCGTGGTTTGGGTTTCAGCTATGCTCGGGCTCCTCCAAAGGCGCCAGTGTCAAGCGCAGTGGTGAAGAAGAAAACAGCTGCTGCCCGGATTGGTTCCACTGTTACTGGAACAGATGCTGATCTACGCAGATTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACCAGGTGGCATCGAATTGCTATGATACGTAAACTTTCAAGTGAGCAAGCAGCATCTGGAGTTAAGGTTGACCCAACGACTATCAGCAAATATGCTCGTGGCCAACGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAGGGAGAAGTGCCAGGAGATTTGGGATCGACAAGTTCAAAGTCTTTCAGCTGTGAATGGTGATGAAAATGAGAGTGATTCCGAAGGAAACAGTGATCTAGATTCTTTTGCTGGTGATCTGGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGACAAGAGGGTACCAATGGTTTTAAACGTGACAAGGTTGATGGTGTCAAGGGTCTTAAAATGAGAAGACGTCCAACCTTAGCCCAGGCAGAGGAGGAAATAGAAGACGAAGCTGCTGAGGCTGCTGAACTATGCAGATTACTCATGGATGATGATGAAGATGAGAGGAAGAAAAAGAAAAAGACTAAATTTGTTGTGGAAGAAGCAGGAGTAATTCCAAAACTACAGCCAAGATTTATCTTTGACAATACAGATCAGGTGAAGCAAATAACTAATACTGTGCAACTAGCCGGAGCCAATATATTGAAAGAAAATCTAGTTAAAAATCTCAGGGAGGAGGATGGCTTTTCTGCTAGAAAAAGCAAATCAGTGAAGGTCAATAAAACTAAAAAGAGTGACCTTTCACCTATTAGTGTGGCAAATAAGAAAATAAAGTTAAATATTGGGGAGCCGCCAAAGGTATTCAAGGAGAAAAAGCCGTCCAGGGAAAGTTTTGTTTGTGGAGCTTGTGGCCAGCTTGGGCACATGAGAACAAACAAGAACTGTCCAAAATACGGTGAAGATCCAGAAGCACAACCTGAATCTACAGACGTGGAAAAAACGGGTGGAAAATCAAGCTTGTTGGATCATTCTGGTCAGTCACAGCATAAAGCCGTTTCGAAGAAGCTTATTTCAAAAAGCTCATCAAAAATTGCTCTGGTTGATGCTTCTGAGGGAGAAAAATCTAGTTTGAAGACGAAAGTTATTCCTGTGAAGTTCAAATGCAGCTCCACTGAAAAACCTGTTATTGAACCCGCACAGAGCTCTGATAAGCCAGGCACTTCTGACTCAGAAACTGCCAAGTCTGCTAAGATCAGTAGAATCTTAATTCCCAAGAAAGTGAAGTCAGATGATATGCAAGCCGAGTCTCGCAAACATTCCATTGCTATACGCCCTCCAGCTGATCCAAGTAGAACTCAAGTTGATTCTCGTAAGCCGTCAATTAAAATTCGACCACCTACAGAAACGGATAGGGAGCAGCCCCAAAAGAAAATTATTATAAAACGCACGAAGGAAGTTATTGATCCGGACCAGTTCAGTCCTAGTGAGAACATAGGGTTTGAGCACAGAAAAACGAAAAGAATTGTTGAATTGTCAAATTTTGAGAAGCACAGAAAACAGGAGACCATGTATAGATCTGAAGACGCGTTGGCAAAGCAGAAAGCTAAAGAGGATAGAAGATGGTGGGATGAGCAAGAGAAAAGGAGAAAAGAAGAGAGATTCCGAGAAGAACGGGCAAGGAGGCTTCATAAGGAAGAAATGAGGATGCTAAAAGAGCAAGAAAGGTTAGCCGAATTAAAAAGATACGAAGAAGATATTAGGAGAGAGAGGGAGGAGGAAGAAAGGCAGAAAGCAAAGAAGAAGAAGAAAAAGGCCGCAGAGTTTAGAGACGAGTATATAGATGACCACAGAACAAGATTTAACAACAGAGTGACAGAAAGAGACCGGAGTGGAAAAAGAAGATCTGTTGTTGAGTTGGGAAGGTATGCAGCCGAATATACACCGCCACCAAAACGGCGCAGAGGTGGAGGGGGAGAGGTTGGTTTAGCAAACATTTTGGAGCATATTCTCGAGGCTCTCAAAGGCCGGTATGAGCTGTCGTACCTTTTCTTGAAACCTGTGTCCAAGAAAGAAGCTCCCGACTACCTGGACATTATCGAGAGGCCGATGGATCTTTCAAGAATCAGGGAAAGGGTGAGGAATATGGAGTACAAAAGCCGGGAAGATTTCAGACACGATGTGTGGCAGATTGCATATAATGCCCACAAGTATAACGATGGGAGAAACCCAGGAATTCCTCCTCTTGCTGATCAGCTTTTAGAGTTTTGTGATTATTTGTTAAATGAGAATGATGATAGCCTAACTGAAGCTGAAGCTGGTATTGAAACTAGGGATTTCTAG 5976 0.426 MRLSGHSRRSGRIKKPRGNQQEAGKSHSFNSCLPWIDRTAGSKFVTISAGVLRSIFFSSFGFGDSFGNKTRKHTNLLGRRNAGVWFSGGKGLGRKQKSEGLSDMAYDSDSPSQDGRDEDDDEEYEEAGQGNRLLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPNIVEQDYGEKAEGAVDYEDIDEEYDGPETEAANEEDHLLPKKDFFSVEASLEALKSRSSVFDDENYDEESENEQDLVNGTPEANNISSTGEPVVSLVDASKGEQSQELESHDGSQQSEELDTDLQKLLEEGPEVLKGSTPLPVLCVEDGMVILRFSEIFGIHEPLRKGGRREQRPSIPRDRYKSLNVSDIVEEDEEAFFRGPSHSLLLNKQACVVQNGITESRDADLDLSKLGYLHGAASMTVKDGPQRKDSCLSAEPMKQDCSGLAWEGNSLLCADFYPLDQQDWEDEIIWGNSPAASNNNHESSEISGSAFGPLGRDEGEIESGMQNIQLEPPKELEEKNHSVFLCSSPVSLEPFGSRDSSGAKANSLSKNLFHPQLLRLESRPELDISNPADDRRENISEEHDQNGLVKHFTKLTLQNQDMMEGSWLDKIIWEEVNRPIVKPKLIFDLQDDQMHFEVLDSKGGRHLRLHAGAMILTRPLKSSNGDSSEQPGHGNQYGWRSIANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRARALWYPHDNEMAVKEQGKLPTQGPMKIIMKSLGGKGSKLHVDAEETLSSVKAKASKKLDFKPLETVKIFYLGKELEDQKSLAAQNVRPNSLLHLVRTKIHLWPRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYYQKCSPDDQGGSLLRNTDSSLGHVISLDPADKSPFLGDLKHGCSQSSLETNMYRAPIFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHLCREFQAAEKRHLHPYIRVDGLLSQFSYLSEASIRKKIKEYAILQKGTNGQSILVKKRNFRMWSEDELRKMLTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKTAAARIGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGQEGTNGFKRDKVDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDDEDERKKKKKTKFVVEEAGVIPKLQPRFIFDNTDQVKQITNTVQLAGANILKENLVKNLREEDGFSARKSKSVKVNKTKKSDLSPISVANKKIKLNIGEPPKVFKEKKPSRESFVCGACGQLGHMRTNKNCPKYGEDPEAQPESTDVEKTGGKSSLLDHSGQSQHKAVSKKLISKSSSKIALVDASEGEKSSLKTKVIPVKFKCSSTEKPVIEPAQSSDKPGTSDSETAKSAKISRILIPKKVKSDDMQAESRKHSIAIRPPADPSRTQVDSRKPSIKIRPPTETDREQPQKKIIIKRTKEVIDPDQFSPSENIGFEHRKTKRIVELSNFEKHRKQETMYRSEDALAKQKAKEDRRWWDEQEKRRKEERFREERARRLHKEEMRMLKEQERLAELKRYEEDIRREREEEERQKAKKKKKKAAEFRDEYIDDHRTRFNNRVTERDRSGKRRSVVELGRYAAEYTPPPKRRRGGGGEVGLANILEHILEALKGRYELSYLFLKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFRHDVWQIAYNAHKYNDGRNPGIPPLADQLLEFCDYLLNENDDSLTEAEAGIETRDF 1991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0313 1991 PRINTS Bromodomain signature 1890 1903 IPR001487 GO:0005515
Lele56g0313 1991 PRINTS Bromodomain signature 1938 1957 IPR001487 GO:0005515
Lele56g0313 1991 PRINTS Bromodomain signature 1904 1920 IPR001487 GO:0005515
Lele56g0313 1991 PRINTS Bromodomain signature 1920 1938 IPR001487 GO:0005515
Lele56g0313 1991 MobiDBLite consensus disorder prediction 88 129 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1311 1330 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1522 1588 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 479 506 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 245 306 - -
Lele56g0313 1991 Pfam Bromodomain 1879 1953 IPR001487 GO:0005515
Lele56g0313 1991 SMART ubq_7 770 842 IPR000626 GO:0005515
Lele56g0313 1991 Gene3D - 1739 1990 IPR036427 GO:0005515
Lele56g0313 1991 Coils Coil 1781 1823 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 261 288 - -
Lele56g0313 1991 ProSitePatterns Bromodomain signature. 1892 1949 IPR018359 -
Lele56g0313 1991 Pfam Zinc knuckle 1512 1532 IPR041670 -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 667 684 - -
Lele56g0313 1991 Pfam Protein of unknown function (DUF3591) 689 1256 IPR022591 -
Lele56g0313 1991 FunFam Transcription initiation factor TFIID subunit 1 752 842 - -
Lele56g0313 1991 Pfam TATA box-binding protein binding 120 164 IPR009067 -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 667 718 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 695 709 - -
Lele56g0313 1991 SUPERFAMILY Ubiquitin-like 741 840 IPR029071 -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1667 1701 - -
Lele56g0313 1991 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 116 1990 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Lele56g0313 1991 SMART bromo_6 1807 1977 IPR001487 GO:0005515
Lele56g0313 1991 Gene3D - 752 842 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1601 1711 - -
Lele56g0313 1991 SUPERFAMILY TAF(II)230 TBP-binding fragment 127 165 IPR036741 -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1 28 - -
Lele56g0313 1991 ProSiteProfiles Ubiquitin domain profile. 770 840 IPR000626 GO:0005515
Lele56g0313 1991 CDD Bromodomain 1877 1972 - -
Lele56g0313 1991 Pfam Ubiquitin family 774 842 IPR000626 GO:0005515
Lele56g0313 1991 Coils Coil 1372 1392 - -
Lele56g0313 1991 ProSiteProfiles Bromodomain profile. 1887 1957 IPR001487 GO:0005515
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1747 1768 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1543 1577 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 289 306 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1635 1656 - -
Lele56g0313 1991 MobiDBLite consensus disorder prediction 479 494 - -
Lele56g0313 1991 Gene3D - 124 171 IPR036741 -
Lele56g0313 1991 CDD Ubl_TAFs_like 770 841 - -
Lele56g0313 1991 SUPERFAMILY Bromodomain 1859 1980 IPR036427 GO:0005515
Lele56g0313 1991 MobiDBLite consensus disorder prediction 1606 1627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0313 Lele-ChrLele56 2390989 2408288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0313 770 840 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 39.437 4.61e-08 52.8