Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0312 ATGGTTTTCGATTCCTGCTTTTCCACAGAGGCATTGCCTGATGGAATGTACCAAATATATTTACATGAAATCATTACCGAGTTACATGAAGAATTCCCGGACTCTTCCTTTTTGGCTTTCAATTTCCGTGAAGGGGAGAAACGTAGTCAATTTGCTGAAATTCTTTGTGAATACGATGTTACTGTGATGGATTATCCGCGACAGTACGAGGGTTGCCCTATTCTTCCAGTGTCTTTGGTTCAACATTTTCTTCGTGTTTGTGAGAGTTGGCTTTCACTTGGAAATCAACATAATGTTATCCTTCTCCACTGTGAGAGAGGAGGTTGGCCTCTCTTGGGGTTTCTTTTAGCTAGCTTTCTAATTTATGGAAGACTACACAGCGGTGAACGGAAGACACTTGAAATGGTGCATAGAGAGGCACCCAAAGGTTTCTTACAGCTATTGTCGCCTTTGAACCCGTTGCCATCTCAACTTCGTTATGTTCAGTATGTAGCAAGAAGGAACATAGCTCCTGAGTGGCCACCGCCTGAGAGAGCGCTTTCTCTAGATTGTGTCATTCTCAGAGCCATTCCTAACTGTGATGTGATCAAGATTGACATACAATGTTTAGTCCAAGGAGATGTGGTATTGGAGTGTGTCCATTTGGACTTGGATCCAGAAAGGGAAGTGATGATGTTTCGCGTAATATTCAACACGGCATTTATTCGATCCAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGACTCAAAGGAGCGGTATCCAAAAGGCTTCCGAGCTGAGGTTTTGTTTGGGGATGTTGAGAGCATATCTCCTCCAAAAGCCCCAACTACTGTGTTAAATGGCGAGGAGAAAGGTGGATTGCCCATTGAAGCTTTTTCAAGGGTTCCAGAACTTTTTAGTGGTGTGGAGTGGCTCGACAGTGGTGAAGATGCTGCAGTATGGTTACTTAAACAACTTTCTGTGTTAAATGATGTCAAAGAGCTTTCAAGGTTGCAAGGTAAAGCAAGTTGGTACTCATCACCTGCTGACTCTGAAGATGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAAGCCTTTGATGTTATTCCAAAGTCTTCTACTGATATTTCCAAGTTATTGGCACCTGACAACCCTGATTCAATCCATTTAGATTTTGAAAGTGATGGTAGAAATATTGTACACCTTACTTCAGAACCTCCAGATCCATCCGCTGGAAGTGTTCAACTGTCGCATCATGCCATTTGTAATGAATATCCTCACAATTCATCTCCACCTTTACCACCACCAGCACCTTCTCCACTTTGTCCACCTCTTTCTAATATCAGTGGAGATCTTTGCACTTCTCCTACAGCATCGTCAGCAAATTGCAAGAGCCCAATACTAACCCCTCCACGACCACCTCCTCCTCCTCCTCCTCCATCAAGCATTTCAACTTCATCTTATACTAAGCCCCTCCAAGTTGCAAGACCTCTATCAACCCCACCACCTCCTCCCTCCCCTCCTGCTCTAGCTCATAATGCTCCTACACCCCCTCCACCTCCACCTCCACCACCACCTCCTGTGGCAAAGCCTCCAGATGCGCCTTTTCCACCACCCCTAACTAGTCAAGGCACAATACCACCTCCTCCACCACCACCTAATCGAGGTGCAATGCCACCTCCGCCTCCGCCTCCGCCTCCGCCTCCACCTCCACCTCCGCCTCCACTACCTAGTCGAGGTGCAACACCACCTCCACCTCCTCCACCACTACCACCACCACCTGGTCAATGTGCACCTCCACCTCCTCCTCCAACACCACCTAGTCGAGGTGCAATGCCACCGCCACCTCCACCACCACCACCACCACCACCATATGCTCATGACACAAATCCACCTCCACCGCTGCCGCCACCTAGTCAAGGTGCAACACCACTTCCACCTGCACCACCTGGTTTGGGTACAGCACCTCCCCCGCCTCCACCACCCGGTCGGGGTGCAGCACCTCCCCCGCCTCCGCCCCCTGGTTGGGGTGCACCACCACCTCCTCCCCCTCTTGCAGCTAAGGGATGTGGTGTGCTGCCACCACCCCCATCCACTGGCAAAGGTAGACCTTTAGCATCAACAACTATTGGAAGAGGTCGAGGTTCTAGTGGCATTGCTAATGCCCCTAAGAAAGCTTCATTAAAGCCCCTACATTGGGTGAAAGTTACACGAGCAATGCAAGGGAGTCTATGGGCTGATTCATCGAAACAAGATAATCAATCAAGGCCCCCTGAAATTGATATATCAGAACTTGAGAGTCTGTTTTCAGCAGCATCTGCTTCTGATGCAAGCCGTGCTAAAGGTGTAGGTCGGCGTGGTTCTAATATCAATAAACCTGAGAAAGTTCAATTGGTATGTTACTCCTCAGTTGGCATTTACGTATTAGGGTATGTTCCTAGGGATGCAAGATATGGTACTTTAGAGCATGATCCCTCTGAATTGATTGACTTGCGAAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCCTTGCCAGACATGCTTGCTAGGGGTCTACAACAATTAGGTCCTCAAAGAGCTCCAGATTGCTATAGTGCAAGGAGCTTATGCATTTGATTTTGCTATCTGGTCATCCAGAATGCAGTTCTGGCCTTGGATTCTTCTACTTTAGACATTGATCAGGTTGAGAATCTTATCAAGTTCTGTCCCACAAAGGATGAAATGGAAATGTTGAAGAATTACACTGGGAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTCATAGAGTTGATGAAGGTTCCACGAGTTGAAGCTAAATTACGAGTTTTTGCTTTTAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATTAAATTTGAACACAATCAATGATGCCGCTAGGGAGGTGAAAGAATCTATGAAGTTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTAAATCAGGGAACAGCACGAGGATCTGCAGTAGGATTCAAATTAGATAGCCTTCTTAAATTATCTGATACCCGGGCAAGGAATAACAAAATGACTTTGATGCATTATTTGTGTAAGCTTCTTTCTGAGAAAATGCCAGAATTGCTAGATTTTGGCAAGGATCTTGTTCATTTGGAAGCAGCTTCAAAGATCCAACTAAAAGGATTGGCTGAAGAGATGCAAGCGGTTAGCAAAGGTCTGGAAAAAGTTGAGCAAGAACTTACTGCTTCAGAAAATGATGGTGTTATATCTGCAGGCTTCCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGAAGTGAGGTCACTCATATCATTGTATTCTGAAGTGGGAAGAAATGCAGACTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAGTCCTGGTTGTCTTCGTGAAGACGTTCAACAAATCAAGGGAGGAGAACGAAAGGCAGGCAGACGCTGAAAAGAAGAAATTGGAGAAAGAAGCCATGAAGGAACAGCGAACACCTGTAAATACAAATTTAAAAAAAAGATGTTCACTAGATAATTGA 3585 0.4527 MVFDSCFSTEALPDGMYQIYLHEIITELHEEFPDSSFLAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPILPVSLVQHFLRVCESWLSLGNQHNVILLHCERGGWPLLGFLLASFLIYGRLHSGERKTLEMVHREAPKGFLQLLSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCVILRAIPNCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVIFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGDVESISPPKAPTTVLNGEEKGGLPIEAFSRVPELFSGVEWLDSGEDAAVWLLKQLSVLNDVKELSRLQGKASWYSSPADSEDENNESSTADSSDEAFDVIPKSSTDISKLLAPDNPDSIHLDFESDGRNIVHLTSEPPDPSAGSVQLSHHAICNEYPHNSSPPLPPPAPSPLCPPLSNISGDLCTSPTASSANCKSPILTPPRPPPPPPPPSSISTSSYTKPLQVARPLSTPPPPPSPPALAHNAPTPPPPPPPPPPPVAKPPDAPFPPPLTSQGTIPPPPPPPNRGAMPPPPPPPPPPPPPPPPPLPSRGATPPPPPPPLPPPPGQCAPPPPPPTPPSRGAMPPPPPPPPPPPPYAHDTNPPPPLPPPSQGATPLPPAPPGLGTAPPPPPPPGRGAAPPPPPPPGWGAPPPPPPLAAKGCGVLPPPPSTGKGRPLASTTIGRGRGSSGIANAPKKASLKPLHWVKVTRAMQGSLWADSSKQDNQSRPPEIDISELESLFSAASASDASRAKGVGRRGSNINKPEKVQLVCYSSVGIYVLGYVPRDARYGTLEHDPSELIDLRRAYNCEIMLSKIKIPLPDMLARGLQQLGPQRAPDCYSARSLCIXFCYLVIQNAVLALDSSTLDIDQVENLIKFCPTKDEMEMLKNYTGNKEMLGKCEQFFIELMKVPRVEAKLRVFAFKITFSSQVNDLRLNLNTINDAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLSEKMPELLDFGKDLVHLEAASKIQLKGLAEEMQAVSKGLEKVEQELTASENDGVISAGFRKVLKNFLDIAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQVLVVFVKTFNKSREENERQADAEKKKLEKEAMKEQRTPVNTNLKKRCSLDN 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0312 1194 Pfam C2 domain of PTEN tumour-suppressor protein 193 268 IPR014020 -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 1159 1178 - -
Lele56g0312 1194 Gene3D - 174 273 - -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 447 465 - -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 398 723 - -
Lele56g0312 1194 ProSiteProfiles Formin homology-2 (FH2) domain profile. 717 1178 IPR015425 -
Lele56g0312 1194 SUPERFAMILY Formin homology 2 domain (FH2 domain) 826 1179 - -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 466 483 - -
Lele56g0312 1194 Coils Coil 1153 1180 - -
Lele56g0312 1194 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 192 269 IPR035892 -
Lele56g0312 1194 ProSiteProfiles C2 tensin-type domain profile. 148 270 IPR014020 -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 427 442 - -
Lele56g0312 1194 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 51 164 IPR029021 -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 341 367 - -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 495 700 - -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 1159 1194 - -
Lele56g0312 1194 Coils Coil 1059 1086 - -
Lele56g0312 1194 SMART PTEN_C2_2 175 269 IPR014020 -
Lele56g0312 1194 Pfam Formin Homology 2 Domain 881 1152 IPR015425 -
Lele56g0312 1194 Pfam Formin Homology 2 Domain 722 851 IPR015425 -
Lele56g0312 1194 PANTHER FORMIN-J 193 621 - -
Lele56g0312 1194 Gene3D Formin, FH2 domain 719 1164 IPR042201 -
Lele56g0312 1194 Gene3D Protein tyrosine phosphatase superfamily 1 168 IPR029021 -
Lele56g0312 1194 SMART it6_source 478 1193 IPR015425 -
Lele56g0312 1194 Coils Coil 957 977 - -
Lele56g0312 1194 MobiDBLite consensus disorder prediction 1179 1194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0312 Lele-ChrLele56 2381803 2390186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0312 2 370 FH2 protein (formin) Gene Family AT1G31810 67.470 0.0 610