Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0307 ATGTCACCATCGACGGCAGCTCCGCCTGTGAGGGACGAGAGGGTTCCAGCGCAGCCACAGTGGAGCCAACAGGAGACGAGGGAGTTCATAGCGATCCGTGCGGAGCTGGAACGGGACTTCACTGCGTCTAAGCGAAATAAAACCCTCTGGGAGGTTGTCAGTAACAAGATGAGGGAGAGAGGCTTCAGGAGGAGTCCTGAACAGTGTAAATGCAAGTGGAAAAACCTTGTTAATCGTTATAAGGGGAAAGAGACATCAGATCCAGAGCATGGTAGACAGTGTCCCTTTTTTGAAGAATTACATGCCATCTTTGCTCAAAGAGCACAGAACATGCAGCGGTTACTTCTTGAATCTGAGGCCCGTTCAACTCAGCCAAAGAAAGGGATGAAAAGGCCGAGCGGAGATCGGTCCTCAGAGGAATTCTCAGAAGATGATGATGAGGTTGAATATGACAGTGAAGAGGAAAGACCTGCAAGAAGCAACTCTCGCAAAAGGAAAGCTGACAAGGTTGCAATGGAGAAGTCTTCCAAGGCAAGTAATGCATCAGATGCTATCAGCAATACTGCCAATAGCATTCAGGAAATGCTTAAGGAATTTTTCCAGCAGCAGCTGAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCAGGAAAGACAGCTGTTTGAGCAGGAATGGAGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGATTGATGATTGAGCAGGCATGGAGGGAGAGAGAAGAGCAGAGAAGAATAAGAGAAGAGAGCCGAGCAGAAAGGAGAGATGTACTGTTGACGACCCTTTTGAACAAGCTCATCCATGAATCTAATTAG 843 0.4828 MSPSTAAPPVRDERVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSNKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFAQRAQNMQRLLLESEARSTQPKKGMKRPSGDRSSEEFSEDDDEVEYDSEEERPARSNSRKRKADKVAMEKSSKASNASDAISNTANSIQEMLKEFFQQQLRMEMQWREMMERRAQERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRIREESRAERRDVLLTTLLNKLIHESN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0307 280 Pfam Myb/SANT-like DNA-binding domain 19 103 IPR044822 -
Lele56g0307 280 MobiDBLite consensus disorder prediction 123 138 - -
Lele56g0307 280 FunFam Zinc finger and SCAN domain-containing 20 21 82 - -
Lele56g0307 280 SMART sant 17 79 IPR001005 -
Lele56g0307 280 PANTHER FI21293P1 16 277 - -
Lele56g0307 280 Coils Coil 225 245 - -
Lele56g0307 280 MobiDBLite consensus disorder prediction 153 173 - -
Lele56g0307 280 MobiDBLite consensus disorder prediction 1 23 - -
Lele56g0307 280 ProSiteProfiles Myb-like domain profile. 21 77 IPR001005 -
Lele56g0307 280 MobiDBLite consensus disorder prediction 118 185 - -
Lele56g0307 280 Gene3D - 21 82 - -
Lele56g0307 280 CDD GT1 19 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0307 Lele-ChrLele56 2347412 2348840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0307 2 280 Trihelix Transcription Factor Family AT2G38250 44.170 3.21e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele56g0307 Myb_DNA-bind_4 5.9e-23 CL0123