Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0303 ATGGGCGTTTGGCTGATGAAATGGCAATGGCCATGGCTTCTTTATGTTCTGCTGATATGTCATGCAATCAATAGGAGTGAAGCAATCAGTCCTGATGGAGAGGCACTTCTTAGCTTCAGGACAGCAGTTAGCCCCAATAGTGACCTGTTACCTTGGAGGCCTGAGGATCCGGACCCATGTAAATGGAAAGGAGTAGGATGTGATCCCAAAACCAAGAGAGTGACAAATCTGTTTCTAGATCATCTCAAGTTAAGTGGGTCTATTTCAGCTGACCTTGGGAAGCTAGAGCATCTGAGGATTCTATATTTGCATAGTAACTACCTTAGTGGAGTGATCCCAAGTGAAATCGGAAATCTTTCACAACTTCAAAATTTCAATGTGTCGTTCAATTTTCTGGTCGGACCAATACCTTTGGATGGCGTGCTTGCCAACTTCACTGAAAGCTCCTTTCTTGGAAATCTTGGTTTATGTGGAGTGCAAATCAATACAACATGCAAGAATACCAGTTCGCCTAATTCCAATCCTCAATCTTCAACATCAGACCAAAATCAAAATGGAAAAAGGAAAGATTCTGGCGGGCTGCTTATTAGTGCATCAGCAACTGTGGGCGCACTACTTTTAGTGGCACTTATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATCACAGAGAGAGTTTAGCAGTGGATGTCTGTGGAGGGGCATCTATTGTTATGTTTCATGGAGATCTACCATATTCTTCTAAAGATATTATTAAAAAACTAGAGACTTTAAATGAGGAACACGTGATTGGTTGTGGAGGATTTGGAACAGTTTACAGGCTCGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATAGTAAAGTTAAATGAGGGCTTTGATCGATTTTTTGAGAGAGAGCTAGAAATTCTTGGAAGCATAAAACACAGATACCTTGTGAACTTAAGAGGATATTGCAATTCACCTTCATCAAAGTTGTTAATATATGATTACCTACCTGGTGGTAGTCTTGATGAAGCTCTTCATGTGTTGAGTGGAAAGCGACCAACAGATGCATCATTCATTGAGAAGGGCCTCAATATTGTTGGTTGGGTAATGCCATACAACCTAGACATTAGCTTTAAGTTGAACATGCTTTTCGTGTGCGGCTTACTGTAG 1173 0.4075 MGVWLMKWQWPWLLYVLLICHAINRSEAISPDGEALLSFRTAVSPNSDLLPWRPEDPDPCKWKGVGCDPKTKRVTNLFLDHLKLSGSISADLGKLEHLRILYLHSNYLSGVIPSEIGNLSQLQNFNVSFNFLVGPIPLDGVLANFTESSFLGNLGLCGVQINTTCKNTSSPNSNPQSSTSDQNQNGKRKDSGGLLISASATVGALLLVALMCFWGCFLYKKFGKNHRESLAVDVCGGASIVMFHGDLPYSSKDIIKKLETLNEEHVIGCGGFGTVYRLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLPGGSLDEALHVLSGKRPTDASFIEKGLNIVGWVMPYNLDISFKLNMLFVCGLL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0303 390 SUPERFAMILY L domain-like 43 172 - -
Lele56g0303 390 Pfam Protein kinase domain 263 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0303 390 ProSiteProfiles Protein kinase domain profile. 261 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0303 390 Gene3D Ribonuclease Inhibitor 87 166 IPR032675 -
Lele56g0303 390 SUPERFAMILY Protein kinase-like (PK-like) 241 354 IPR011009 -
Lele56g0303 390 FunFam Leucine-rich repeat receptor-like kinase 32 154 - -
Lele56g0303 390 ProSitePatterns Protein kinases ATP-binding region signature. 267 293 IPR017441 GO:0005524
Lele56g0303 390 Gene3D Ribonuclease Inhibitor 27 86 IPR032675 -
Lele56g0303 390 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 71 135 - -
Lele56g0303 390 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 235 336 - -
Lele56g0303 390 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Lele56g0303 390 Gene3D Phosphorylase Kinase; domain 1 237 336 - -
Lele56g0303 390 MobiDBLite consensus disorder prediction 168 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0303 Lele-ChrLele56 2335142 2339309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0303 346 370 Receptor kinase-like Gene Family AT2G35620 84.000 7.16e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele56g0303 Pkinase 3.4e-11 CL0016