Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0292 ATGGAGGCTCAGGAGATTCTTCAGCGAAAAGGAAAATCCTCCTCAGCAGTTGATGATGATTTGGATAAATCAAGAGTGGCTGAAGCTAAATCAAGTCTTTTGGTTCAGGGAATCACCTATACAGAGCCTTTGCCTACTGGATGGAAGCCACCTGTACCAATTAGAAGAATGTCTAAAACAGCATGTGATTTGATTCGGAAGCAGTGGCATATAATAGTTGACGGTGAAGACATTCCACCCCCAATTAAGAATTTCAAGGATATGAGGTTTCCTGCGACAATTTTGAAGAAGTTGAAAGCAAAAGGGATTGTTCAACCAACACCTATTCAAGTACAAGGCCTTCCTGTGATCTTATCCGGGAGGGATATGATTGGGATTGCATTCACAGGATCAGGGAAAACTCTAGGCTTTGTGTAG 417 0.4221 MEAQEILQRKGKSSSAVDDDLDKSRVAEAKSSLLVQGITYTEPLPTGWKPPVPIRRMSKTACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPATILKKLKAKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLGFV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0292 138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 137 IPR027417 -
Lele56g0292 138 Gene3D - 51 138 IPR027417 -
Lele56g0292 138 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 74 138 - -
Lele56g0292 138 MobiDBLite consensus disorder prediction 1 22 - -
Lele56g0292 138 Pfam DEAD/DEAH box helicase 107 137 IPR011545 GO:0003676|GO:0005524
Lele56g0292 138 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 83 111 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0292 Lele-ChrLele56 2272109 2272651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0292 71 134 Eukaryotic Initiation Factors Gene Family AT3G19760 34.375 5.50e-06 42.7