Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0291 ATGGTGCCTATTGCTCCAGGAGAATGTCCATTTGGTTTGACTATTTGCCCATCGAGGGAATTGGCTAGACAGACGTATGAAGTGGTTGAACAATTCTTGATACCTCTGAGAGAAGCTGGATATCCTGAGCTTAGGCCATTGCTTTGTATTGGTGGGGTAGATATGAGATCGCAGCTAGACTTTGTGAAGAAGGGGTGTTCACATTATTATGAGGCTGATAGATTGGTAGATTTGGGATTTGAAGATGACATTAGAGAAGTGTTTGATCGCTTCAAAGCTCAAAGGCAGACGCTCTTATTTTCTGCCACTATGCCAACCAAAATTCTGAATTTTGCTAGAAGTGCTCTGGTGAAACCGGTCATTGTCAATGTGGGGCGAGCAGGCGCAGAAAATCTTGATGTAATGCAGGAGGTAGAGTATGATAAGCAAGAGACAAAAATAGGGTATCTCCTTGAGTGCCTGCAAAAGACCCCACCTCCAGTTTTAATATTCTGTGAGAACAAGGCTGATGTGGATGACATTCATGAATATTTTCTCTTGAAAGGAGTGGAAGCAGTGGCTATTCATGGAGGCAAAGATCAGGAAGAGAGAGAGTATGCAATTGCAGCCTTTAAGGCTGGAAAGAAAGATGTGTTGGTTGCAACTGATGTTGGGATTGGATTTTCCTGA 669 0.4305 MVPIAPGECPFGLTICPSRELARQTYEVVEQFLIPLREAGYPELRPLLCIGGVDMRSQLDFVKKGCSHYYEADRLVDLGFEDDIREVFDRFKAQRQTLLFSATMPTKILNFARSALVKPVIVNVGRAGAENLDVMQEVEYDKQETKIGYLLECLQKTPPPVLIFCENKADVDDIHEYFLLKGVEAVAIHGGKDQEEREYAIAAFKAGKKDVLVATDVGIGFS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0291 222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 217 IPR027417 -
Lele56g0291 222 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 146 222 IPR001650 -
Lele56g0291 222 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 122 IPR014001 -
Lele56g0291 222 Pfam DEAD/DEAH box helicase 12 67 IPR011545 GO:0003676|GO:0005524
Lele56g0291 222 Pfam Helicase conserved C-terminal domain 146 218 IPR001650 -
Lele56g0291 222 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 12 217 - -
Lele56g0291 222 Gene3D - 132 219 IPR027417 -
Lele56g0291 222 Gene3D - 71 130 IPR027417 -
Lele56g0291 222 Gene3D - 2 70 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0291 Lele-ChrLele56 2271329 2272075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0291 12 217 Eukaryotic Initiation Factors Gene Family AT1G72730 25.214 3.35e-15 72.0