Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0275 ATGCTTTCTCTCCAATGCAGCAGTAAGCATCATCATCATCATCACTATCAGCCGCCGCGCCGCCACAAGTCTGACATGAATCCATGCCCATGCATCTCCCTCTCCTCTTCCGCCGCCGCCACCGCCGTCATATGCATTCTGCAACTCTTCTTCCCGGCGGCGATGTCCCAACCCCAGAACATGAGAACAACCCCATACGTCTTCGGCCCCTTCGACGTCTCTAACTACACAACCTTGAAAGTCATTCAACCGGCGTCGATCAACTTCGGAGCTCTCCAAATAACTCCGGACACCGCCGGCAACGTCCCCCTCGCAAACACCTCCGGTCGAATCCTCTTCCGGGAACCCTTCACACTCTGGGAAGACACCGGAAAGGTTGCTTCCTTCAACACTTCATTCCTCATCAACGTCTATCGCGTCAACAACGCCACTCCCGGCGAAGGCGTCGCCTTCGTCATTGCCCCAAACCTCGACCTCCCCCGAAACAGCCATGGCCAATACCTTGGCCTCACCAACTCCACCACCGATGGCAGCCCCGACAACCACATCGTCGCAGTCGAACTAGATACCGTCAAGCAAGACTTCGACCCCGACGACAACCACATCGGACTCAACATCAACAGCGTCAAATCAAAAACCAACGTCTCACTGTCTCAATTCGGAATCCAGATCGCTCCAGACAGTGCCAAATACTATGTAATCTGGATAGACTACAACGGTTCAAGCAAGAAAATTAACATATTCATCAAAGAACAACCCGACAGAAACGCACCTATAGTATCAAAACCAGAAGAACCAGTGTTAACCACAGATCTAGATCTCAAAACCATCGTGAAACAGAGCTCTTACTTCGGTTTCTCTGGTTCCACCGGAATAACCTACCAGTTAAACTGTGTTCTGAGATGGAACATGACGGTGGAGGTTCTTACAGAAAACAAGAACAAGTCGCGATCTTTGAAGATGGGTTTTGGTATTGGGGTGCCATTGATGGCTTTGATTCTTGTGGGGATTGTTGGGTCAGTGTATTATGTTTATAGGAAGAAGAGAAGAAGAAGGTTGGACGACGAACAGATACTGGGGACGTTGAAGAGCTTGCCGGGAACGCCGAGAGAGTACTCGTTCAAGGAATTGAAGAAGGCCACGAACAATTTCAGTGAAAACAATAAGCTCGGAGAAGGAGGGTATGGGATGGTGTACAGAGGGATTTTGCAGAAAGAGAATAATTTGGAAGTTGCAGTGAAGAAATTCTGCAGAGATAAGATGAAATGCAAAGATGATTTCTTAGCTGAACTCACCATTATCAACCGTCTTCGTCATAAGCATCTTGTGAAGTTACTAGGTTGGTGCCACAAGAATGGGGTGTTAGTGTTGGTGTATGAGTTCATGCCGAATGGCAGCTTAGACAATCACCTTTTCTTTGAGGAAGGAAAACCCACAACATCGAGCCCTCTGAGTTGGAACCTACGTTACAAAATCCTCTCCGGTGTTGCTTCAGCGCTTAACTACCTTCACAACGAGTACGACCAGAAAGTAGTCCACAGAGATCTCAAAGCCAGCAACATCATGTTAGACTCCGACTTCAACGCTCGCCTAGGCGACTTTGGCTTGGCTCGAGCCATTGAGCACGAGAAAACCTCGTACGCCGAGGTCGAAGGAATCCACGGCACGTTGGGTTACATAGCGCCCGAGTGCTTCCACACAGGGAAGGCGACACGACAATCAGATGTATTCAGTTTTGGAGCGGTTCTTCTGGAAGTGGTGTGCGGCGAGAGGCCGTGGACGAATAGGGAAGGGTTTCAGCTGTTGGTGGACTGGGTTTGGTATTTGTATGGTGAAGGAAGGATTCTCGAGGCAGTGGATAAAAGGCTTGGGAATGAGTATGAGGTTGAAGAAGCAAAGAAAATATTGAAATTAGGGTTAGCATGTTCTCATCCAATTGCAGGTGAGAGGCCGAACATGCAAACCATTGTGCAGATTCTAAGTGGGGCCGTGCCAGAGCCTTATGTGCCAGCAAGCAAGCCTGCATTTATTTGGCCAGCTGTGGATTTTGGAAGCTTTATTAGTGATCTCACAACACCATCTTCAACCACTGTGAACACACCTCTTCATACAGATTCAGATCCTCTACAGTCAAATTCATCAAAGTGA 2148 0.4856 MLSLQCSSKHHHHHHYQPPRRHKSDMNPCPCISLSSSAAATAVICILQLFFPAAMSQPQNMRTTPYVFGPFDVSNYTTLKVIQPASINFGALQITPDTAGNVPLANTSGRILFREPFTLWEDTGKVASFNTSFLINVYRVNNATPGEGVAFVIAPNLDLPRNSHGQYLGLTNSTTDGSPDNHIVAVELDTVKQDFDPDDNHIGLNINSVKSKTNVSLSQFGIQIAPDSAKYYVIWIDYNGSSKKINIFIKEQPDRNAPIVSKPEEPVLTTDLDLKTIVKQSSYFGFSGSTGITYQLNCVLRWNMTVEVLTENKNKSRSLKMGFGIGVPLMALILVGIVGSVYYVYRKKRRRRLDDEQILGTLKSLPGTPREYSFKELKKATNNFSENNKLGEGGYGMVYRGILQKENNLEVAVKKFCRDKMKCKDDFLAELTIINRLRHKHLVKLLGWCHKNGVLVLVYEFMPNGSLDNHLFFEEGKPTTSSPLSWNLRYKILSGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARAIEHEKTSYAEVEGIHGTLGYIAPECFHTGKATRQSDVFSFGAVLLEVVCGERPWTNREGFQLLVDWVWYLYGEGRILEAVDKRLGNEYEVEEAKKILKLGLACSHPIAGERPNMQTIVQILSGAVPEPYVPASKPAFIWPAVDFGSFISDLTTPSSTTVNTPLHTDSDPLQSNSSK 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0275 715 MobiDBLite consensus disorder prediction 696 715 - -
Lele56g0275 715 Gene3D - 64 325 - -
Lele56g0275 715 Pfam Protein tyrosine and serine/threonine kinase 387 660 IPR001245 GO:0004672|GO:0006468
Lele56g0275 715 SMART serkin_6 384 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0275 715 FunFam probable L-type lectin-domain containing receptor kinase S.5 369 461 - -
Lele56g0275 715 FunFam probable L-type lectin-domain containing receptor kinase S.5 462 665 - -
Lele56g0275 715 PANTHER - 95 664 - -
Lele56g0275 715 Pfam Legume lectin domain 68 316 IPR001220 GO:0030246
Lele56g0275 715 ProSitePatterns Legume lectins beta-chain signature. 184 190 IPR019825 -
Lele56g0275 715 Gene3D Phosphorylase Kinase; domain 1 369 461 - -
Lele56g0275 715 MobiDBLite consensus disorder prediction 1 24 - -
Lele56g0275 715 CDD STKc_IRAK 390 660 - -
Lele56g0275 715 ProSitePatterns Protein kinases ATP-binding region signature. 390 415 IPR017441 GO:0005524
Lele56g0275 715 ProSiteProfiles Protein kinase domain profile. 384 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0275 715 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 314 IPR013320 -
Lele56g0275 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Lele56g0275 715 CDD lectin_legume_LecRK_Arcelin_ConA 85 306 IPR001220 GO:0030246
Lele56g0275 715 Gene3D Transferase(Phosphotransferase) domain 1 462 667 - -
Lele56g0275 715 SUPERFAMILY Protein kinase-like (PK-like) 365 660 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0275 Lele-ChrLele56 2148983 2153614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0275 46 676 Receptor kinase-like Gene Family AT5G55830 37.445 1.30e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele56g0275 PK_Tyr_Ser-Thr 4.8e-49 CL0016