Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0269 ATGAAATACTGCCTCCTTAGGATCATACGCTTTATGCTTTGGCTAATTCCGCTGTTATGGAGCTTAACTTGCCATGCTTTGAGATTAGAAAGCTCCCAAATCTTGCCTGTGGATCATATTGAGCAAGGCTTTAATGGCTCATCCCCAACCTTAAGCCGTCCAAGCCGATCTATTCTGTCCTTTTCACCTAAGCCCAGTACGACCCTTGTTGCAACCCTCGATGGGACAATATACTTGGTGGAGATTGGTTCTATGAGGGTAATATGGTCATTACCTACTGGATCACCAATCTACCACTCATATCAAGCTCCTCTCAACAATGATAATGTTAAAGAAAATGTATGTGGATTAGCTAGCAGGTTCATGGAATGTGGAGATGATTGGGCACTATATATCCAAAGCAAGCACTTTGGTAAAATGAAACTCTCAACATCTGTGGCAGATTTTGTTGCGGCTACGCCTACCTTGTCAGATGATGGAGGTGTTATTCTTGGATCCAAGAGAAGTACTTTGTTCGAAATTGATGCTATAAGTGGAAAGCTCGTTCGAAGTTATGCTGCTGATAATCTTTCTACTGTGTGGAGTAATAATATGCATAGGGGAACAAATATTGTCAGTACAAAGAATAAAGGGCTGGCTGATCCTGCAATGCTAAGCACACCGGAGCTTCTGCTTAAAATAATTAGAACAGATTATTCTCTACAAGGTGTATGTCCTAAATCTGGAAAAGTTTTGTGGACTATGAATGTAGCTGAATTTAAGGCGTCATTATTCTGTGGACATAATGAAAATCTGTTTACTGGGGCTTCGTTAGATTCAGAGGATAAATATGCCTTCAACAATGACTTGGATTTTGCTATGCCGTATGCATGTCATGAGTTAAAAGAAGTACATCGCTTGCGAAAGAATCTTCTTTTTGGTAATCTCACTGAAAGTTTACCTGGGGCATATCATGATAAGGAAATGCTTCCAGAGCCTAATTCAGATCTGATGCTTCTTCCACAGTCTAATTTAGATGCTTCTTTAAGTCAGCATGATGATAATATGACGCTTCCTACTTTTCCAAATGCCTTGCCTTCTTTGCCTCAAAATTTTAATCCCCATGTCAATGATGATAATGCAGCCACTCTCTCTCAACCTCCTGCAGAGATTAGTGCACGAGGGGAAGTTGATAGAAACAAGGTGATAGAATGGCCAAGGTCATCTTTATTATTGTTTATGCTCTTATTTCTGGTTCTTTTGATGTATTATCTTCCAGTGGTCAAAAGGCCAGTTATGTCTTTGGTCCAGAATGGTGGATCTGAAATTAAAGTTTCTCCTCCTCTTAAGAAAAAAAGAGCCCGTAAGTCCGGAAAAAACAATGGCATTGATGACAAAAGAAATAAACATCTATCATCAAAAGATGAGGATATAATGTCTAGTGGCAAAATTGCTAGGGAAGCATTGCCACATGTTGAAAAAGTTGAAGGAGCCAATGGACGTCAAATCGGCAAACTCTTTGTATCAAATAAAGAAATTGCCAAGGGAAGTAATGGTACTATAGTGCTTGAGGGCACATATGAAGGTCGGGCGGTTGCCATCAAGCGTTTGGTCCAGTCCCATTATGATATTGCTGTTAAAGAAATTCAAAATCTTATTGCATCGGACCATCATCCTAACGTCGTCCGATGGCATGGGGTTGAATTTGATCAAGATTTTATATATCTTGCTCTGGAAAGTTGTATATGCAATTTAGATGATTTGATTCAGATTTATTCAGATTGCTCTTCAAAACCAGTGTCTAGTAAAAACCAATCTTCTGAGTGTTTGAAGGTCCAAATAGAGATGGGAAAGGATAACATGCAAGAGCTTTGGAAAGCAAATGGCCATCCATCCTCTTTATTATTGAAGTTGATCAGGGATGTAGTTTCTGGTCTTGTTCATTTACATGAATTGGGAATAATACATCGTGATTTGAAACCTCAGAATATTTTGATAACTAAGGAAAGATATTTAGGTGCAAAAGTTTCTGATATGGGCATCAGCAAACGCCTTCTTGGAGATATATCTTCCTTTAGTCATAATGGTACCTGTTATGGCAGTTCTGGTTGGCAAGCACCAGAACAACTTCTTCAAAGACGTCAAACACGAGCAGTAGATTTATTTAGTCTAGGTTGTGTCATCTATTTTTGCATAACTAAGGGAAGACATCCATTTGGAGACCGTCTTGAACGAGATTTCAATATTGTGAAAAATAAAAAGAACCGTTCTCCAGTGGAATCCATTCCTGAGGCTGAAGATCTTATTTTTGGTTTATTAAACCCTACTCCTAAGTTAAGGCCAAAAGCTATTGAAGTGCTGCATCATCCTTTCTTCTGGAGTTCTGAGATGAAACTTTCATTTCTTCGTGATGTTAGTGATAGGGTGGAACTAGAAGATAGGAAGATTGGTTCTAATCTCTTAATTTCATTAGAAACTATTGCGCCAAAGGCTTTAGATGGTGCAAATTGGGATGAAAAGATGGAACCTGCATTCATTGCTAACATTGGCCAATACAGGCGATATAAGTTTGACAGTGTTCGTGACTTGTTGCGAGTTATGAGAAACAAGCTGAATCATTATAGAGAATTGCCTCAAGAAATTCAGCAACTTCTAGGACCTGTTCCAGAAGGATTCAATGCCTACTTTGCTAGTCGATTTCCTAGACTCTTGATTAAAGTGTATAAAATTATACATAAATATTGCGAGCGGGAGGAATGTTTCCAAAGGTATTTTAAAATTGATTAG 2766 0.3861 MKYCLLRIIRFMLWLIPLLWSLTCHALRLESSQILPVDHIEQGFNGSSPTLSRPSRSILSFSPKPSTTLVATLDGTIYLVEIGSMRVIWSLPTGSPIYHSYQAPLNNDNVKENVCGLASRFMECGDDWALYIQSKHFGKMKLSTSVADFVAATPTLSDDGGVILGSKRSTLFEIDAISGKLVRSYAADNLSTVWSNNMHRGTNIVSTKNKGLADPAMLSTPELLLKIIRTDYSLQGVCPKSGKVLWTMNVAEFKASLFCGHNENLFTGASLDSEDKYAFNNDLDFAMPYACHELKEVHRLRKNLLFGNLTESLPGAYHDKEMLPEPNSDLMLLPQSNLDASLSQHDDNMTLPTFPNALPSLPQNFNPHVNDDNAATLSQPPAEISARGEVDRNKVIEWPRSSLLLFMLLFLVLLMYYLPVVKRPVMSLVQNGGSEIKVSPPLKKKRARKSGKNNGIDDKRNKHLSSKDEDIMSSGKIAREALPHVEKVEGANGRQIGKLFVSNKEIAKGSNGTIVLEGTYEGRAVAIKRLVQSHYDIAVKEIQNLIASDHHPNVVRWHGVEFDQDFIYLALESCICNLDDLIQIYSDCSSKPVSSKNQSSECLKVQIEMGKDNMQELWKANGHPSSLLLKLIRDVVSGLVHLHELGIIHRDLKPQNILITKERYLGAKVSDMGISKRLLGDISSFSHNGTCYGSSGWQAPEQLLQRRQTRAVDLFSLGCVIYFCITKGRHPFGDRLERDFNIVKNKKNRSPVESIPEAEDLIFGLLNPTPKLRPKAIEVLHHPFFWSSEMKLSFLRDVSDRVELEDRKIGSNLLISLETIAPKALDGANWDEKMEPAFIANIGQYRRYKFDSVRDLLRVMRNKLNHYRELPQEIQQLLGPVPEGFNAYFASRFPRLLIKVYKIIHKYCEREECFQRYFKID 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0269 921 PANTHER IRE1-RELATED 140 919 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lele56g0269 921 Gene3D Phosphorylase Kinase; domain 1 485 572 - -
Lele56g0269 921 ProSiteProfiles KEN domain profile. 788 920 IPR010513 GO:0004540|GO:0006397
Lele56g0269 921 SMART serkin_6 500 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0269 921 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 789 921 - -
Lele56g0269 921 Pfam Ribonuclease 2-5A 791 918 IPR010513 GO:0004540|GO:0006397
Lele56g0269 921 Gene3D - 47 281 IPR015943 GO:0005515
Lele56g0269 921 ProSiteProfiles Protein kinase domain profile. 500 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0269 921 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 59 251 IPR011047 -
Lele56g0269 921 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 492 572 - -
Lele56g0269 921 Gene3D KEN domain 788 921 IPR038357 -
Lele56g0269 921 MobiDBLite consensus disorder prediction 451 470 - -
Lele56g0269 921 CDD RNase_Ire1 789 918 - -
Lele56g0269 921 SUPERFAMILY Protein kinase-like (PK-like) 500 790 IPR011009 -
Lele56g0269 921 Pfam Protein kinase domain 502 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0269 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Lele56g0269 921 MobiDBLite consensus disorder prediction 437 470 - -
Lele56g0269 921 Gene3D Transferase(Phosphotransferase) domain 1 607 787 - -
Lele56g0269 921 SMART PGNneu 851 905 - -
Lele56g0269 921 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 610 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0269 Lele-ChrLele56 2093971 2098500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0269 506 784 MAP Kinase Kinase Kinase AT1G09000 24.746 9.80e-19 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lele56g0269 Pkinase 1.6e-35 CL0016