Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0244 ATGATTGACGTTTGGCTTGTGATGTTAATGGTCCTCTCTAATGGGCTTTCTTCATCGGGGGCTGGCATGAATGATTCAGCAATACCTGAATTTGTAAATATTGGAGCACTCTTCTCTTTCAATACCACTGCTGGTAGAATTGTAAGAGTAGCTATTGAAACAGCAGTTGCAGATATAAATTCCGATCCTTCCATTCTTGGAAAAACTAAGCTGAGGGTCTCAATGCAAGAGGACTCCAAATACAGAGGTTTTCTGAGCATTTCTGAGGTCTTGCAGCTCATGGCTAGACACACTGTGGCTATAATTGGTCCCCAGACATCTATAACAGCTCATGTCATATCTCATGTTGCAAACGAGCTCCAAGTTCCACTTCTATCATTTTCAGCCACAGACCCTACACTTTCTTCACTCCAATTCCCATTCTTTGTTAGAACTGCTCCTAGTGATATTTATCAGATGACTGCAATTGCCGAGCTTATAGACTTCTATGGGTGGAGAGAAGTTATCGCCATTTATGCCGACGATGACCATGGGAGGAACGGGATTGGTTCTTTAGGGGATAAGCTTGCAGAGAGACGTTGTAAAATCTCATATAAAGCACCAATAAGCCCTGAAGCAACTAGGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTCTTGCTGAATCTCGGATTATAATTCTTCACACTTATGCTGCTTGGGGCCCCCAGGTGTTTGATGTGGCGAAATATCTTGGGATGATGGGAACTGGGTATGTCTGGATAGCCTCCAACTTTCTCACTAGTCTTCTGGACTCTGAGAGTCCCATCCATTCAGATCAAATAGATGAAATCCAAGGAGTTCTTACACTGCGTTTGCACACACCCGATTCAGAGCTCAAGAGAAGGTTTTTTTCTAGGTGGAAAAACCTGACTGGCGGAATGACTGCTGATGGTCCCCTTGGATTGAACAGTTTTGGTCTCTATGCATATGATACTGTTTATATGCTTGCTCGTGCACTTGATACATTTTTCAAACAAAGGAACCGAATCACATTCTCAAATGATTCAAATTTATCTCAACTACGTGGAGACAGCTTGCATCTTGATGCAGTGAACATCTTTGATCAAGGAAATCTGTTGCGTACAAGTATTTATGGGGTTAACATGACTGGGGTAACAGGTCATATTAAGTATGCAGCTGATGGGAATCCTATGAATCCATCATATGAAATCATCAATGTGATAGGAACAGGTGCAAGGAGGATTGGTTATTGGTCTAATCACTCTGGATTATCTGTTGATCCTCCAGAAGTACTTTATTCAAAACCAGCCAATCGTTCCAGTGCGAATCGAAAGCTACTTCCTGTGATCTGGCCTGGAGACACAACACAGAAGCCCCGTGGTTGGGTTTTTCCAAACAATGGAAGGCACTTAAGAGTTGGAGTACCGAAAAGGGTTAGTTACCGACAATTTGTCTCACAAATACAAGGCACTGACATGTTCAAGGGATTTTGCATTGATGTATTCCTTGCTGCAGTGAACTTACTGCCCTATGCGGTTCCCTATAAGTTTATTCCATTTGGGGATGGTCTCAGCAATCCTAGTAACACTGAGCTTGTTCGTCTGGTAACGGCTGGCGTCTTTGATGCTGCAGTGGGTGACATTACGATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATCGAGTCTGGTCTAGTGGTCGTAGCGCCTGTTAAGAAGGTAGAATCCAATGCATGGGCTTTTATGAGGCCATTTACGCCAATGATGTGGTGTGTCACAGCAATCTTCTTCTTAGTCGTGGGAGCTGTTGTTTGGATCTTGGAGCATAGGCTGAATGATGATTTTCGAGGACCTCCCAAAAAGCAAGTTGTGACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTCTCTCACAGGGAAAATACAGTGAGCACACTTGGTCGCCTCGTGCTACTTATATGGCTATTTGTGGTTCTTATAATTAATTCAAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAACAGCTTTCTTCGCCCATTAAAGGCATTGAAAGTTTAGTAAACAGCAAAGAACCTATCGGCTACTTGCAGGGTTCTTTCACTCGAGATTACTTAGTTGAGGAAGTTGGCATTCATGAATCAAGACTTGTTCCTCTGAAAACAGGAGATGAGACTGCTAAAGCATTAAAAGCTGGCCCCAAAAAAGGCGGTGTCGCTGCATATGTCGATGAGCGTGCTTACATTGAGCTCTTCCTTTCAAGCCGGTGTGATTTTACTATTGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCTAGGGACTCTCCTTTAGCAGTTGACCTTTCAACAGCGATTTTGGAACTGGCAGAGAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTCTGAACAGCGCGTGCCTAGCACAAGGTGCAAAGCTTGATGTGGACAGACTTGATTTTAAATCCTTCTGGGGTCTCTATTTGGTATGTGGACTAGCTTGCTTGCTGGCTCTCTTCATCTATCTCATACAGATGATGACACAGTACACCAAACACTATTCCGACGAAAGCGAGTCCTCCGGCAGCCAGAGCTCGATGTCCTCGCGCCTCCGGACTTTCCTGACATTCGTGGACGAGAAAGAGGAGGAAGTTAAGCAAAGGTCCAATAGAAGGCAACAGGAAAGGATCTCATACAGAAGCAGTAGTACTGTGGGTCGATCATTGTCATCTTCAACCATATACTCCTCCAACAAAGACTATGCTCAATCCTCTTCAAACAAAATTGATTATGCTTATGACGCCTGA 2838 0.4352 MIDVWLVMLMVLSNGLSSSGAGMNDSAIPEFVNIGALFSFNTTAGRIVRVAIETAVADINSDPSILGKTKLRVSMQEDSKYRGFLSISEVLQLMARHTVAIIGPQTSITAHVISHVANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDIYQMTAIAELIDFYGWREVIAIYADDDHGRNGIGSLGDKLAERRCKISYKAPISPEATREEITDVLVQVALAESRIIILHTYAAWGPQVFDVAKYLGMMGTGYVWIASNFLTSLLDSESPIHSDQIDEIQGVLTLRLHTPDSELKRRFFSRWKNLTGGMTADGPLGLNSFGLYAYDTVYMLARALDTFFKQRNRITFSNDSNLSQLRGDSLHLDAVNIFDQGNLLRTSIYGVNMTGVTGHIKYAADGNPMNPSYEIINVIGTGARRIGYWSNHSGLSVDPPEVLYSKPANRSSANRKLLPVIWPGDTTQKPRGWVFPNNGRHLRVGVPKRVSYRQFVSQIQGTDMFKGFCIDVFLAAVNLLPYAVPYKFIPFGDGLSNPSNTELVRLVTAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVAPVKKVESNAWAFMRPFTPMMWCVTAIFFLVVGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFSHRENTVSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKEPIGYLQGSFTRDYLVEEVGIHESRLVPLKTGDETAKALKAGPKKGGVAAYVDERAYIELFLSSRCDFTIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLNSACLAQGAKLDVDRLDFKSFWGLYLVCGLACLLALFIYLIQMMTQYTKHYSDESESSGSQSSMSSRLRTFLTFVDEKEEEVKQRSNRRQQERISYRSSSTVGRSLSSSTIYSSNKDYAQSSSNKIDYAYDA 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0244 945 FunFam Glutamate receptor 709 816 - -
Lele56g0244 945 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Lele56g0244 945 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Lele56g0244 945 Gene3D - 583 709 - -
Lele56g0244 945 FunFam Glutamate receptor 148 299 - -
Lele56g0244 945 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Lele56g0244 945 Gene3D - 50 400 - -
Lele56g0244 945 Gene3D - 466 582 - -
Lele56g0244 945 PIRSF IGluLR_plant 1 941 IPR017103 -
Lele56g0244 945 Gene3D - 148 425 - -
Lele56g0244 945 CDD GluR_Plant 472 812 - -
Lele56g0244 945 Pfam Bacterial extracellular solute-binding proteins, family 3 492 812 IPR001638 -
Lele56g0244 945 MobiDBLite consensus disorder prediction 906 921 - -
Lele56g0244 945 MobiDBLite consensus disorder prediction 895 921 - -
Lele56g0244 945 Gene3D - 754 819 - -
Lele56g0244 945 FunFam Glutamate receptor 583 713 - -
Lele56g0244 945 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Lele56g0244 945 SMART GluR_14 471 814 IPR001320 GO:0015276|GO:0016020
Lele56g0244 945 FunFam Glutamate receptor 467 583 - -
Lele56g0244 945 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 888 - -
Lele56g0244 945 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0244 Lele-ChrLele56 1931107 1935015 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0244 5 913 Ion Channels AT3G51480 59.385 0.0 1159