Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0242 ATGCAAAAGTCAGCCTTTTCTTCTCCACTTTTCAATTTGAATTTCCCTCTTGCTCACCGCTCAGCTCTATTTTCTGGTTTTTCCCTCAACTTGGAGAACAAAGATAAACCCTCCGTCGGAGTTCTCACTAGGTTCCAGTCTGAACCGGCTGATCCGAATGTCAATGCTTCAAGTGCTCATGGAACTGCTGCACACACAAAGTTCCAAAGGGTAATGGGGTCTGCACTTAAGCTTTGTTTTGTGTTTGCCGAACAGCACATCATCATGCAGAAAATATGGCTTCTTGTGCTTGTGATGATTTTCTACTGCGTCGTTTATTCAAACGGATTAAGTGGTGTTCCTACAAGACCCCGTTCCGTCAACATTGGAGCAATTCTATCTTTCAATTCAACCGTTGGAAAAGTCGCAAAAGTTGCAATCGATGCAGCAAAGGATGATATAAACTCCAACCAATCAGTTCTTAATGGAACTAAACTCAATATTTCATTCCAGGACACTAAATTCTCCACTGGTTTTCTCGGCATCATTGACTCATTATTATTGATGGAGAATGACACAGTGGCCATAATAGGCCCTCAATATTCAGTGATGGCACATGTGATTTCACACATAGCCAATGAACTGCAAGTTCCCTTACTGTCATTTGCAGCAACAGACCCTACCTTGACTTCTCTTCAATTCCCATATTTTGTTAGGACAACACAGAGTGATCACTTTCAGATGGCTGCCGTGGCAGATATCGTTGACTACTATCAATGGAGAGATGTGATAGCAATCTACATTGATGATGATCATGGAAGAAATGGTATAGTTTCATTAGAAGATAAGCTAGCTGAGAAACGTTGTAAGATCTCATACAAAGCCCCTCTTAGGCCAAATAAGACAAACGGGGAAGAAATAAACAGTGCATTAGTTAAGGTCATTATAAGGGAGTCCAGGGTAATAGTGCTACACATATACCCTAGCTTTGGTCTTGATGTTCTTAGTGTGGCTGAGTCACTAGGCATGTTGGGAAGTGGGTATGTTTGGTTGGCCACTGATTGGCTTTCTACAGTTCTGGATACTGAGCCATCAGGCTCAGCTTCACACATGAATGATCTCCAAGGTGTTATAACCTTGAGAATGTACACACCTGAATCAGGAATGAAGAAGACTTTCACTAACAGATGGAGTAATTTAATAAAGGATAAAGCGCCTGATCAAAGTCCTTTCATGTGGAACACTCATGGCCTTTATGCCTATGACACTGTTTGGGTCCTTGCATATGCACTCGATTCATTTTTCAACAGTGGAGGAACTTTATCATTTTCAAATTATTCCAGTCTAAACAAGCTAATAGGGGATAGATTAGACCTGAATTCTGTTGGGGTCTTTGCTAATGGTAGTTTATTGCTGGAAGAAACTATGAAGGTCAACAGAACTGGTTTAACAGGTCAAATGATGTTTAGTCCAGATGGTGAACTTATGAACCCTGCATATGAGATTATCAATGTAATTGGTACTGGTGTTAGAAGGATTGGGTTTTGGTCTAATTCTTCTGGTTTACACACTGGACTAGCACCTGATAAACATTCGAAGTCAAGTAAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACTGCAACACCTCGCGGTTGGGTTTTCGCCAACGATGGAAGGCATTTGAAAATTGGGGTGCCTCTGAGGATCAGTTACCATGAATTCGTTTCAAGAATTGATGGATCTGAAATGTTTGGCGGTTATTGTGTAGATGTGTTCACAGCTGCACTGGAATTATTGCCTTATCCAGTTCCATACAAATTTGTCCCTTTTGGAGATGGTAAAACCAATCCACTAAACTCAGAACTTCTGCAAAAAATCACAACCGGTGAGTTTGATGCTGTGGTAGGTGACATTACAATTACCACAAACAGAACAAAGATAGTGGATTTCACACAACCATATATTGAGTCCGGGCTAGTTGTTGTGGCTCCTATTAGAAAGTCAAACTCAAATGCTTGGGCTTTCCTAAGACCATTTACTCCAATGATGTGGTTTGTCACTGGAATGTCTTTCTTTGTTGTGGGAGCAGTTGTGTGGATTTTAGAACGCCGAGTCAATGATGATTTTAGAGGTCCCCCTAGAAGACAGTTTGTCACCATTATATGGTTTAGTTTTTCAACCCTGTTCTTTGCACATAGAGAGAGAACTTTGAGCACCCTGGGTCGCTTAGTGCTGATAATATGGCTATTCGTAGTGCTGATATTGAACTCCAGCTACATAGCAAGCTTGACTTCCATTCTCACAGTGGAACAGCTCTCTTCTCCTGTGAAAGGAATTGAAAGCTTAGTTACCAGCAAAGATCTCATTGGCTATCTGCGAGGTTCATTTGCAGAGAACTACCTCACTGATGAACTCAACATTATGAAATCCAGGCTTGTTCCCCTGAATTCTCCTTCAGAATATGAGAAAGCCTTGAAGGATGGACCTGCCAATGGTGGTGTTGCAGCAATAATCGATGAACGTGCTTACATGGAGCTCTTTCTCGCAACCAGATGTGAATTTGGAGTCGTTGGTCAAGAGTTCACCAAAATGGGTTGGGGTTTTGCTTTTCCGAGGGACTCTCCTTTGGCAATAGACATGTCAACAGCGATCTTGAAACTATCAGAGAACGGTGATCTTCAAAGAATACATGACAAATGGCTTTCAAGAAGTGCTTGCAGTTCAGAAGGATCAAAGCAAGGCATAGATAGATTAGAGCTAAAGAGCTTCTGGGGTCTCTTCCTTCTCTGTGGCATTGCCTGTTTCATAGCTCTCCTTTGTTATGTTATTCGCATGGCCTACCGTTTCAGCCGCCACTCCGACTGTAACCTCGCCGGCTCGTCGCACTCGGCTCGAATCCGGTCATTTATTTCCTTTGTCAATGAAAAGGAAGATGATGGAAAGAATGGCACCAAGACAAAGAGAAGCAGGAAGGTAGTGCATGAAGATGGGTCAATAGATGGCTCCAATATTGACACTGTTCATTATGAAAACGATTCTTCTCAGTGTTAA 3036 0.42 MQKSAFSSPLFNLNFPLAHRSALFSGFSLNLENKDKPSVGVLTRFQSEPADPNVNASSAHGTAAHTKFQRVMGSALKLCFVFAEQHIIMQKIWLLVLVMIFYCVVYSNGLSGVPTRPRSVNIGAILSFNSTVGKVAKVAIDAAKDDINSNQSVLNGTKLNISFQDTKFSTGFLGIIDSLLLMENDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLTSLQFPYFVRTTQSDHFQMAAVADIVDYYQWRDVIAIYIDDDHGRNGIVSLEDKLAEKRCKISYKAPLRPNKTNGEEINSALVKVIIRESRVIVLHIYPSFGLDVLSVAESLGMLGSGYVWLATDWLSTVLDTEPSGSASHMNDLQGVITLRMYTPESGMKKTFTNRWSNLIKDKAPDQSPFMWNTHGLYAYDTVWVLAYALDSFFNSGGTLSFSNYSSLNKLIGDRLDLNSVGVFANGSLLLEETMKVNRTGLTGQMMFSPDGELMNPAYEIINVIGTGVRRIGFWSNSSGLHTGLAPDKHSKSSKGLYGVIWPGQTTATPRGWVFANDGRHLKIGVPLRISYHEFVSRIDGSEMFGGYCVDVFTAALELLPYPVPYKFVPFGDGKTNPLNSELLQKITTGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSNSNAWAFLRPFTPMMWFVTGMSFFVVGAVVWILERRVNDDFRGPPRRQFVTIIWFSFSTLFFAHRERTLSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSKDLIGYLRGSFAENYLTDELNIMKSRLVPLNSPSEYEKALKDGPANGGVAAIIDERAYMELFLATRCEFGVVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGIDRLELKSFWGLFLLCGIACFIALLCYVIRMAYRFSRHSDCNLAGSSHSARIRSFISFVNEKEDDGKNGTKTKRSRKVVHEDGSIDGSNIDTVHYENDSSQC 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0242 1011 MobiDBLite consensus disorder prediction 972 1000 - -
Lele56g0242 1011 FunFam Glutamate receptor 236 395 - -
Lele56g0242 1011 Gene3D - 667 803 - -
Lele56g0242 1011 MobiDBLite consensus disorder prediction 972 993 - -
Lele56g0242 1011 CDD GluR_Plant 556 896 - -
Lele56g0242 1011 Pfam Ligand-gated ion channel 898 929 IPR001320 GO:0015276|GO:0016020
Lele56g0242 1011 Gene3D - 138 490 - -
Lele56g0242 1011 Gene3D - 551 666 - -
Lele56g0242 1011 CDD PBP1_GABAb_receptor_plant 121 515 IPR044440 -
Lele56g0242 1011 Gene3D - 816 903 - -
Lele56g0242 1011 FunFam Glutamate receptor 667 797 - -
Lele56g0242 1011 PIRSF IGluLR_plant 87 1010 IPR017103 -
Lele56g0242 1011 Pfam Bacterial extracellular solute-binding proteins, family 3 581 897 IPR001638 -
Lele56g0242 1011 Gene3D - 236 515 - -
Lele56g0242 1011 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 120 969 - -
Lele56g0242 1011 SUPERFAMILY Periplasmic binding protein-like II 531 898 - -
Lele56g0242 1011 SMART GluR_14 557 898 IPR001320 GO:0015276|GO:0016020
Lele56g0242 1011 FunFam Glutamate receptor 793 900 - -
Lele56g0242 1011 FunFam Glutamate receptor 551 667 - -
Lele56g0242 1011 Pfam Receptor family ligand binding region 138 500 IPR001828 -
Lele56g0242 1011 SUPERFAMILY Periplasmic binding protein-like I 116 547 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0242 Lele-ChrLele56 1921394 1927778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0242 93 998 Ion Channels AT3G51480 56.736 0.0 1063