Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0235 ATGGACAACGGATGCGATGCAAATCACTTGGATGGTGATGTTCTTTTGCCTCCTCGGAAGCGCCTTCTTGCTGGATTGAAGAAACAGAGTTCTGATGGTGATGCTGCCGCCGCCTCTCCATCACCGGCTGCTGCTTCATGTGTTATCACTCCTTCTTCTGCTTCTCCTTCTTCTGCTTCTTTTTCAAGTGAATTTGAAGCTCGCCTTAAGCATTTATTGAATTCTCATTTGAATAACCCTAACCTCAACCCTGAGGAGATTGCCGAGGCCTCGAAAACAGCAGCTGAAGCTGCAACTAAGGCCGCGGAAGCTGCAAGAGCTGTTGCTGAAGAAAAAGCTGCAAGAGCAGCAAAGGCTGTTGCTGCAGCCAAGAGTGCATTAGATCTGGTTGCATCTTTTTCTGAAGAGGGAATCACCAAGGAAAGAAACTTGAAAAAGAACAAGCTAAAGAAGCATTTACCAGTTCAGCTGTTGTACAGAAAAAACCAACCTATGGAAAGTTGTACGAAAGATGAAGAATTAGCCCGTAAGTTACACCGAGCCATGAACAGTTCTCCTAGAATCTCCAAAAATTCTCCAAATTCAGATTCAAAAGGGAATAAACACAAGAAACCTAAAAGCTCTTCAAGCTTTGAAATAACTGAGGTCTCTGATGCTGGCATGGCAGTGGGACAAGATTGCTCATCCTTGAACAATGGGCATGCAGTAGGAGACAAAAATGGTTATGAAGTTTCCATCCAAGAGGTGTGCTCGAGCAAGGAAGATAAGAAGGGAGGCAGATATGATAAATACAGCCAAATGGAGATATATAATGGTGAAGCAGGGTCGAGCCATTCAAAAGAGAAAATCTCTGAAGATTTGTCTCCCATTGGTAAGAAAAGGGGAAGGGTGAAGCTCAAAAAGTTGCCCTTGAGCATTTGCACATCTAAAGATAAGGCACAGCCAAAGGAAGAGAGGACGGCTGGAAGCTCTTCTCTGACTGATATCAATGAAGGCACAGATGCCCTTGTTAATATACCTTTGTTTCAAGTTGAATCATCCACAGAGAGAGTGATCCCAATTGAGGCTACATCAATGTGGAAATGTCAGGAGTTCAAGGCACCAGCATGTATCAAACAGAATAAAGTTGTGCAGTCATAA 1140 0.436 MDNGCDANHLDGDVLLPPRKRLLAGLKKQSSDGDAAAASPSPAAASCVITPSSASPSSASFSSEFEARLKHLLNSHLNNPNLNPEEIAEASKTAAEAATKAAEAARAVAEEKAARAAKAVAAAKSALDLVASFSEEGITKERNLKKNKLKKHLPVQLLYRKNQPMESCTKDEELARKLHRAMNSSPRISKNSPNSDSKGNKHKKPKSSSSFEITEVSDAGMAVGQDCSSLNNGHAVGDKNGYEVSIQEVCSSKEDKKGGRYDKYSQMEIYNGEAGSSHSKEKISEDLSPIGKKRGRVKLKKLPLSICTSKDKAQPKEERTAGSSSLTDINEGTDALVNIPLFQVESSTERVIPIEATSMWKCQEFKAPACIKQNKVVQS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0235 379 MobiDBLite consensus disorder prediction 25 61 - -
Lele56g0235 379 PANTHER OS06G0728500 PROTEIN 1 379 - -
Lele56g0235 379 MobiDBLite consensus disorder prediction 181 211 - -
Lele56g0235 379 MobiDBLite consensus disorder prediction 45 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0235 Lele-ChrLele56 1885760 1886899 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0019 49 126675 130493 Lele56g0235 56 1885760 1886899 CCT
Lele50g0022 50 176244 180011 Lele56g0235 56 1885760 1886899 CCT
Lele51g0021 51 136128 139947 Lele56g0235 56 1885760 1886899 CCT
Lele53g1238 53 21026938 21028062 Lele56g0235 56 1885760 1886899 hybridization
Lele54g1210 54 17657816 17658955 Lele56g0235 56 1885760 1886899 hybridization