Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0229 ATGATGGAGAAGGTAGATTCTGGACGGAAGCTATACACGCGAATGCGACTTTGGGAGTTTCCAGATCAGTATGTCATTGAGCCCACGGATGGCTCTTCTGGTTCTTGTTTGACAGTGAGTCGAGTGGATGGCTCGATGAAGCTTATTGATGCGATTCCAGAATGCAACAAGCTTCGAGTACCTAAGATTTGGACAGTTTTCGGTGTGGCTGGGATGATAAGGCTTTTGGCTGGATCATATTTGCTGGTTATAACTGATCGTGAATGTGTTGGATCTTACTTGGGTCATCCAATTTACAAAGTTTCATCTATGAAGGTTTTTCCATGTGATCATTCTCTTAATAATACCACTGCTGAACAGAAAAAGACAGAGTTGGAGTTTTCCAAGCTGCTAAACATTGCAGAGAAAACGTCTGGTCTGTTCTTCTCATATGTAACCAACTTAACACTGAGTGCCCAGCGATTGAGTGACCTTGTTGATGAATCTAGATTGCTCCCTCTTTGGAGACAGTCTGAGCCCCGATTTCTATGGAACAATTATTTGTTGGAAGTGCTCATTGATAACAAGCTCGATCCATTCTTACTCCCTGTGGTACAAGGAAGTTTTCATTACTTTCAAGCAGCCATTGGAAAGGATATTATTGATGTTACTTTGATTGCCAGGAGATGCACGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGACCCTGATGGTTATGTTGCTAATTTTGTGGAAACTGAGCAAATTATGCAGTTCAATGGGTATACAGCATCATTTGTTCAGATTCGTGGCTCAATCCCATTGCTTTGGGATCAAATTGTTGACCTGACGTATAAACCTAAGTATGAGTTATTGAGACTTGAGGAAGCTCCTCGAGTCATGGAACGGCACTTCCTAGATTTAAGGAAAAAATATGGGGCTGTCTTAGCTGTTGATCTTGTCAACAAGCATGGAGGAGAGGGTCGGCTGAATGAAAAATTTGGAAGCTCAATGCAGCATTTGGCTAGTGATGATGTAAGATATCTGCACTTTGATTTTCACCATATCTGCGGGCATGTTCATTTCGAACGCCTTGCTATCCTTTATGACCAAATTTCAGATTTTCTCGAGAGAAATGGATATCTTCTATTAAATGAGAAGGGAGAGAAAATCAAGGAGCAGCTTGGAGTTGTCCGAACTAATTGTATTGATTGTCTGGATCGTACAAATGTAACTCAGAGCATGATTGGCCGAAATATGTTGGAATTCCAGCTTCGAAGGCTTGGGGTATTTGAGGCTGAAGAAACGATTACTTCGCATCCAAATCTAGATGAAAACTTCAAGATCATGTGGGCCAATCATGGGGATGATATAAGCACCCAATATTCAGGCACGCCTGCTCTAAAAGGAGACTTTGTCAGATATGGGCACCGTACAATGCAAGGAATACTAAAAGATGGATGTAGTGCTCTTATGCGCTATTATTTAAATAATTTTTGTGATGGAACAAAGCAGGATGCAATTGATCTCCTACAAGGACATTACATAGTTTCTGTCAGCAGAAATATGACTACCTCTTCTCAGAAAGGAGGAATCGAAGCTATAGCTTCCTTTCCTCTGGCTTTTTCTCTGGTTATGATTGGATTCGTCTTTGCAACCATGTCATTGAGGCAAGTTCGATACGATTTCCGGCATTTCTTTTTCTCCCTAATGTGGGCAAGCATTAGTATCGCCATAGCGGCATTTGTGAGGGCAAATGGTCGGGTTTTCTGCAACAGACCTCGCCTACACAAGCCACGGCGTTGA 1791 0.4204 MMEKVDSGRKLYTRMRLWEFPDQYVIEPTDGSSGSCLTVSRVDGSMKLIDAIPECNKLRVPKIWTVFGVAGMIRLLAGSYLLVITDRECVGSYLGHPIYKVSSMKVFPCDHSLNNTTAEQKKTELEFSKLLNIAEKTSGLFFSYVTNLTLSAQRLSDLVDESRLLPLWRQSEPRFLWNNYLLEVLIDNKLDPFLLPVVQGSFHYFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQIRGSIPLLWDQIVDLTYKPKYELLRLEEAPRVMERHFLDLRKKYGAVLAVDLVNKHGGEGRLNEKFGSSMQHLASDDVRYLHFDFHHICGHVHFERLAILYDQISDFLERNGYLLLNEKGEKIKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEFQLRRLGVFEAEETITSHPNLDENFKIMWANHGDDISTQYSGTPALKGDFVRYGHRTMQGILKDGCSALMRYYLNNFCDGTKQDAIDLLQGHYIVSVSRNMTTSSQKGGIEAIASFPLAFSLVMIGFVFATMSLRQVRYDFRHFFFSLMWASISIAIAAFVRANGRVFCNRPRLHKPRR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0229 596 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Lele56g0229 596 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
Lele56g0229 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0229 Lele-ChrLele56 1844110 1853420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0229 10 595 Acyl Lipid Metabolism Gene Families AT5G66020 74.276 0.0 965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0035 52 230511 235921 Lele56g0229 56 1844110 1853420 CCT
Lele56g0229 56 1844110 1853420 Lele56g0229 56 1844110 1853420 ECH
Lele53g1245 53 21071885 21082330 Lele56g0229 56 1844110 1853420 hybridization
Lele54g1217 54 17689775 17699069 Lele56g0229 56 1844110 1853420 hybridization