Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0223 ATGGTGATTTCTCATGAGAACAATGCAAACCCTGCGAAACCCTCAAGCTTGCAAGGTCAAATTTTCTTTCTTCTGGGTTTGAATCAAGGATGCTTGGTCGGCGAGAAACGTAGGGCACTGGGCGCCTTCAATCAGAACCTCGTTCGCGTCGTTAACAAGAAGATAGCCGATCCAGTGCACCGACCAATTACGAGGTGGCCCTTCTGTTCTCTCTCTCTCTCTCTGATTTGTGAAATACTGAAACCTGAAGGAGTGAGAAAGAAACTGAGACAGAAGAGTAAGAAAGAAAATAAGAAGTCGAATACATCAAGTTTAAACTCAAATGGATTTGGAGAATGCATATTTGTGGATGAAGAACACAAGTCAGTGAAGGACCACCCAGTACCCATGTCTTCAGAACAATCAGAAGAAGCAATGCAGACTGAAACAGATCAGATGAAGGAAGTTGAGATGGAGGATTTAGTTGAAGATCTTATCATGGACATTGATAGTAGTGATGTGAACAACCATCTTGCAGTTCTGGACTATGTTCAAGAACTTTATTCTTACTACAGAAAAATGGAGGTGCAGGACAAGTTTGATCTCATGCACGAGACTTTGTTCCTTACAGTGAACCTAATAGATAGGTTTTTGGAGAAGCAATCAGTGGTAAGGAAGAGGCTTCAATTGGTAGGTTTAGTGGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCAGTTCCTGTAGTGGAGGATCTGATACTTATATCGGACAAAGCATATACAAGGAAGGAAGTTCTTGAAATGGAGAAGTTGATGCTTAGCACATTGCAGTTTAACATGACAGTGCCCACACCATATGTGTTCATGAGAAGGTTTCTAAAGGCTGCTCAAGCAGATAAAAAAATGGAGTTGCTAGCTTTCTTCTTGATAGATCTATCTCTTGTGGAGTATAGGATGTTGAAGTTCCCACCATCTTTGTTAGCTGCATCTGCAGTTTTTACAGCTCAATGCAGCACCACCTTTGGTTTCAAGCAATGGAGCAAGACATGTGAATGGCACACAGGCTACTCAGAAGATCAACTCTTGGAATGCTCTAAATTGATGGTTGATTTGCACCAAAGGGCTGGAAAAGGAAAACTAACTGCTGTACATAGGAAGTATTGCACATCTAAACTCAACTATACTTCAAAATGTGAACCAGCAAATTTTCTTGTGGCGAATCAACTATAG 1212 0.4125 MVISHENNANPAKPSSLQGQIFFLLGLNQGCLVGEKRRALGAFNQNLVRVVNKKIADPVHRPITRWPFCSLSLSLICEILKPEGVRKKLRQKSKKENKKSNTSSLNSNGFGECIFVDEEHKSVKDHPVPMSSEQSEEAMQTETDQMKEVEMEDLVEDLIMDIDSSDVNNHLAVLDYVQELYSYYRKMEVQDKFDLMHETLFLTVNLIDRFLEKQSVVRKRLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMLSTLQFNMTVPTPYVFMRRFLKAAQADKKMELLAFFLIDLSLVEYRMLKFPPSLLAASAVFTAQCSTTFGFKQWSKTCEWHTGYSEDQLLECSKLMVDLHQRAGKGKLTAVHRKYCTSKLNYTSKCEPANFLVANQL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0223 403 Pfam Cyclin, C-terminal domain 277 393 IPR004367 -
Lele56g0223 403 Gene3D - 270 402 - -
Lele56g0223 403 SUPERFAMILY Cyclin-like 168 274 IPR036915 -
Lele56g0223 403 SMART Cyclin_C_2 277 395 IPR004367 -
Lele56g0223 403 Gene3D - 177 269 - -
Lele56g0223 403 SUPERFAMILY Cyclin-like 276 396 IPR036915 -
Lele56g0223 403 PIRSF Cyclin_A_B_D_E 187 403 IPR039361 -
Lele56g0223 403 PIRSF Cyclin_A_B_D_E 31 192 IPR039361 -
Lele56g0223 403 PANTHER CYCLINS 108 380 IPR039361 -
Lele56g0223 403 FunFam G2/mitotic-specific cyclin-1 265 390 - -
Lele56g0223 403 Coils Coil 132 152 - -
Lele56g0223 403 CDD CYCLIN 275 363 IPR013763 -
Lele56g0223 403 Pfam Cyclin, N-terminal domain 187 274 IPR006671 -
Lele56g0223 403 SMART cyclin_7 184 268 IPR013763 -
Lele56g0223 403 SMART cyclin_7 281 364 IPR013763 -
Lele56g0223 403 CDD CYCLIN 187 267 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0223 Lele-ChrLele56 1806177 1810675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0223 35 400 Core Cell Cycle Gene Families AT2G17620 53.676 1.74e-124 365