Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0213 ATGGCGACGACGTCGTACCGTATCTCCGGATTCCTTCTCTCTCCCTCTCTCTGCTCCCCAAAACTTGATCATCATCCAAGAATTTCATTTCTGAAACCGGTGAACTCTTGTCAGGCACGAAGCGTTAGTGTTGTTAGATCCAGCTTTCCAAACTACTGCACGAAAGCTGCTCTGAACGGGAATTTGGAGACTGTCGTAGTTCCGATGTCTGTGCCAGTGCGGGTTGCACACGAGCTGCTTCTTGCTGGACATCGCTTTTTGGATGTGAGAACTCCCGAAGAATTCAATGCAGGGCACGCTCCAGGCGCAATTAACATACCATATATGTACAGAGTTGGATCAGGTATGACAAAGAATGCCAATTTTGTTGCAGAAGTCTCATCACGTTTTAGAAAAGATGATGAGATTATTGTTGGTTGTCAACTTGGTAAAAGGTCTATGATGGCTGCTACTGACTTAATAGCTGCTGGATTTTCTGGAATTACAGACATAGCCGGTGGATTCTCTGCTTGGACTCAAAATAGTCTTCCAACAGAACAGTGA 543 0.453 MATTSYRISGFLLSPSLCSPKLDHHPRISFLKPVNSCQARSVSVVRSSFPNYCTKAALNGNLETVVVPMSVPVRVAHELLLAGHRFLDVRTPEEFNAGHAPGAINIPYMYRVGSGMTKNANFVAEVSSRFRKDDEIIVGCQLGKRSMMAATDLIAAGFSGITDIAGGFSAWTQNSLPTEQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0213 180 CDD RHOD 76 171 - -
Lele56g0213 180 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 6 179 - -
Lele56g0213 180 SMART rhod_4 70 177 IPR001763 -
Lele56g0213 180 Pfam Rhodanese-like domain 85 173 IPR001763 -
Lele56g0213 180 Gene3D - 59 179 IPR036873 -
Lele56g0213 180 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 69 179 IPR036873 -
Lele56g0213 180 ProSiteProfiles Rhodanese domain profile. 80 180 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0213 Lele-ChrLele56 1750903 1752737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0213 69 177 Sulfurtransferasese or Rhodanese AT5G66170 45.946 1.04e-31 109