Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0201 ATGGCGGTTTCACCTAGAAGCACTTCCAACTTGGAATTGACCATATCTGTCCCTGGCTTTGCTTCTCCTCCTCCTCTTCCTTCATCTGCAGTGAGAGAGTTAGACATAAACCAAGTACCGTCAACAGAAGAGGAATGGATAACAATGGAAGAAGAAGAAGAAGAAGAAAGCGCTAATGGAGGAGGTCCTCCTCGTAAGAAACTCCGTCTTACCAAGGAACAGTCTCGTCTCCTCGAAGACAGCTTCAGACAAAACCACACTCTCAACCCAAAGCAGAAGGAATCATTGGCAAAGCAGTTGAATCTGCGAGCCAGGCAGGTGGAAGTGTGGTTTCAGAACCGTAGGGCAAGGAGCAAGCTGAAGCAGATGGAGATGGAATGCGAGTACCTCAAGAGATGGTTCGGATCGCTGACAGAGCAGAACAGAAAGCTGCACAAGGAAGTCGAAGGGCTCAGGGCTATGAAGGTGGGTCCCCCCACCGTGATATCACCCCACAGTTGCCACCCACTTCCGGCGTCAACCCTAACTATGTGTCCTCGCTGCGAGAAGGTCACGACCACTACCTCAGCCGCCGCCTTGGGACCCACCATGACCTACCGACATTCTCATTCGCCTCCCGCCCCTTCTTCTTCCCTTCTATGA 642 0.5187 MAVSPRSTSNLELTISVPGFASPPPLPSSAVRELDINQVPSTEEEWITMEEEEEEESANGGGPPRKKLRLTKEQSRLLEDSFRQNHTLNPKQKESLAKQLNLRARQVEVWFQNRRARSKLKQMEMECEYLKRWFGSLTEQNRKLHKEVEGLRAMKVGPPTVISPHSCHPLPASTLTMCPRCEKVTTTTSAAALGPTMTYRHSHSPPAPSSSLL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0201 213 Gene3D - 60 129 - -
Lele56g0201 213 Pfam Homeodomain 65 119 IPR001356 GO:0003677
Lele56g0201 213 SUPERFAMILY Homeodomain-like 55 122 IPR009057 -
Lele56g0201 213 MobiDBLite consensus disorder prediction 1 30 - -
Lele56g0201 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 44 205 - -
Lele56g0201 213 FunFam Homeobox-leucine zipper protein 18 49 126 - -
Lele56g0201 213 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Lele56g0201 213 Pfam Homeobox associated leucine zipper 121 155 IPR003106 GO:0006355|GO:0043565
Lele56g0201 213 SMART halz 121 164 IPR003106 GO:0006355|GO:0043565
Lele56g0201 213 MobiDBLite consensus disorder prediction 42 68 - -
Lele56g0201 213 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Lele56g0201 213 MobiDBLite consensus disorder prediction 1 16 - -
Lele56g0201 213 SMART HOX_1 63 125 IPR001356 GO:0003677
Lele56g0201 213 CDD homeodomain 64 122 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0201 Lele-ChrLele56 1672842 1675049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0201 31 185 Homeobox Transcription Factor Family AT1G70920 63.291 1.22e-59 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele56g0201 Homeodomain 4.4e-17 CL0123