LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele56g0186	ATGGAGCCTGATGGCACCACCTCCAACAACGGAGCTGTGCTCTCGCATTGCCTCCAAATAAACATGGAAGAAACTCATCACAAGGTGGTGGCGCCACCTCGCCGGACCACCCTGGAGAAGCTGACTGCGAAGCTGAAAGAAATGTTCTTCCCCGACGACCCTCTTCGCCAATTCAAGGGTCAGCCATTGAAGAAGAAGCTGGCCCTGGCCGCCCAGTATTTCTTCCCTATCCTTCAATGGGGTCCCAATTACAGCCTCACTCTCTTCAAATCCGACATCGTTTCAGGCCTCACCATTGCCAGCTTGGCCATCCCTCAGGGAATCAGTTACGCTAAGCTAGCAAGCCTTCCTCCGATTGTGGGACTCTATTCGAGCTTTGTGCCTCCTCTGGTTTATGCCGTTCTGGGAAGTTCAAGGGACCTCGCGGTGGGACCTGTGTCTATAGCGTCTCTTGTTCTGGGGTCGATGCTGAGGCAAGAGGTGTCCCCAGCTTCAGACCCTGTTCTGTTTCTTGAGCTAGCTTTCACTTCTACCTTCTTCGCTGGTCTCTTTCAAGCGTCTCTTGGAATCCTAAGGCTAGGCTTCATCATTGACTTCTTATCAAAGGCGATTCTGATTGGGTTTATGGCGGGAGCGGCCATTATTGTGTCACTGCAACAACTAAAAAGCTTACTGGGAATCACACATTTCACCACCCAGATGGGCCTAGTTCCAGTGATGACCTCAGTTTTTCACAATACCCATGAGTGGTCATGGCAAACAATAGTGATGGGGTTTTGCTTCTTGGTGTTACTCCTCCTGGCAAGACACGTTAGCATAAGGAAGCCAAAGCTTTTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTGATTATCTCTACCCTTCTGGTATTTGCAATAAAGGCTCAGCATCATGGCATCACTGTTATAGGAAAATTGCAAGAAGGTCTAAATCCTCCTTCATGGAATATGCTGCGCTTTCATGGAACTCATCTGGGTCTTGTACTCAAAACTGGGCTTATCACTGGCATTTTGTCACTCACTGAAGGTATAGCAGTTGGAAGGACTTTTGCAGCTCTCAAGAACTACAAAGTGGATGGAAATAAGGAGATGATGGCCATCGGCTTCATGAATGTGGTTGGCTCCTTCACTTCCTGCTACGTTACTACAGGCTCTTTCTCTAGATCAGCTGTCAATAACAATGCGGGATCAAAATCAGCTGTGTCGAATATAGTAATGTCTGTGACAGTTATGGTGACACTCCTGTTTCTCATGCCACTGTTTCAATACACTCCGAATGTTGTACTAGGATCAATCATAGTCACTGCAGTAATTGGTCTCATGGATATCCCTGCTGCTTATTACATCTGGAAGTTAGACAAATACGATTTCATCGTGATGCTCACCGCTTTCTTCGGCGTCATTTTTATCTCTGTTGAAGAAGGCCTCGCTCTTGCAGTTGGGTTGTCAATCTTGAAGATCCTCCTGCAAGTTACAAGGCCTAAGACAGCGATGTTGGGCAACATACCAGGTACAGACATATATCGAAATGTTGATCAATACGAGGAAGCTGTGCAGTTGCCTGGTTTTCTCATTTTAAGCATCGAGGCTCCCATCAATTTCGCAAACATCACATATCTCAACGAGAGGATCTTACGATGGATAGAAGAATATGAAGAGGAAAATAACATAAAGAAAAACTCAAGTCTTCGATATGTGATTCTGGAAATGTCAGCTGTGAGCAACGTAGACACAAGTGGAGTCTCACTTTTCAGAGAACTGAAACAAGCAATGAAAAACAAGGGCGTTGAGATTGTGTTGGTGAATCCTCTGGCTGAGGTTATGGAGAAACTGAAAAAAGCAGATGAAGGCAGTGACTTGATAAGAGAAGATAACCTTTTCTTAACCGTTGGGGAGGCCGTGGCTTCGCTTTCATCAACGACGAAGGGCCAAGCATCAAATATGGAAGAAGGGGCTCACTTCTGA	1986	0.4637	MEPDGTTSNNGAVLSHCLQINMEETHHKVVAPPRRTTLEKLTAKLKEMFFPDDPLRQFKGQPLKKKLALAAQYFFPILQWGPNYSLTLFKSDIVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPASDPVLFLELAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTTQMGLVPVMTSVFHNTHEWSWQTIVMGFCFLVLLLLARHVSIRKPKLFWVSAGAPLVSVIISTLLVFAIKAQHHGITVIGKLQEGLNPPSWNMLRFHGTHLGLVLKTGLITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGSFSRSAVNNNAGSKSAVSNIVMSVTVMVTLLFLMPLFQYTPNVVLGSIIVTAVIGLMDIPAAYYIWKLDKYDFIVMLTAFFGVIFISVEEGLALAVGLSILKILLQVTRPKTAMLGNIPGTDIYRNVDQYEEAVQLPGFLILSIEAPINFANITYLNERILRWIEEYEEENNIKKNSSLRYVILEMSAVSNVDTSGVSLFRELKQAMKNKGVEIVLVNPLAEVMEKLKKADEGSDLIREDNLFLTVGEAVASLSSTTKGQASNMEEGAHF	661

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele56g0186	661	ProSitePatterns	SLC26A transporters signature.	118	139	IPR018045	GO:0008271\|GO:0008272
	Lele56g0186	661	SUPERFAMILY	SpoIIaa-like	525	644	IPR036513	-
	Lele56g0186	661	FunFam	Sulfate transporter 31	500	647	-	-
	Lele56g0186	661	PANTHER	SULFATE TRANSPORTER	38	648	IPR001902	GO:0016020\|GO:0055085
	Lele56g0186	661	Gene3D	STAS domain	500	647	IPR036513	-
	Lele56g0186	661	ProSiteProfiles	STAS domain profile.	520	644	IPR002645	-
	Lele56g0186	661	Pfam	Sulfate permease family	89	469	IPR011547	GO:0016020
	Lele56g0186	661	Pfam	STAS domain	521	640	IPR002645	-
	Lele56g0186	661	CDD	STAS_SulP_like_sulfate_transporter	521	637	-	-
	Lele56g0186	661	TIGRFAM	sulP: sulfate permease	76	640	IPR001902	GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele56g0186	Lele-ChrLele56	1590894	1596153	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele56g0186	4	652	Inorganic Solute Cotransporters	AT3G15990	63.859	0.0	840