Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0181 ATGTCTGATTCATTCAGTGCCTTCAAGCTTCATCACCCTCACAGTACTCCAAATTCCACCCTTAATTCTGCTGCACCTCCCAAAATCACACCTTTCTGTATTTGCATCCACTGCACCAATGTCATCTCTTTGAATTATCCTCTGGGAGATGAAGGAGCAAGTACAACAACAAGTAGGGGGTTGCATGGGCAATCTCAGCAAAGCTCGAGGTGGAGTCCGACTCCAGCACAGTTACTGAAGCTTGAAGAACTGTACAGACAAGGGACGAAAACGCCGACGGCTGAACAAATACAGCAAATAGCTTCACAGCTACGTCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTACTGGTTCCAGAATCACAAAGCGAGAGAGCGCCAGAAACGACGTCGCCGGGAAATGGAGCAAGCTGCTTCTGATTCCGCTCAAGACAAACAACTGTACGTTGTTAATGTGAGAAGCTCAGAGGAAAAGCAAGACCCTGCAGGTTTGAGAGGGACGGGTTATCAAGTTAAAGAGACAAAGAAGTTCGCATCTTCTCCAAACTGGAGTGCCCTTCGACAGGAAATAGCAGAGAAAAGAACACAAGTCTTGAAGAAACCAGAGCAAACAACACCACTCTCACAAAAGTTTACCTCTCAAAATCATAATTTACCATTTATACTCAACAGAGAAAATTATTGCACCTATTGTGATGAAGAAGAATATTCAAACACAAGAACCCTTGAGCTTTTTCCTCTTAAGAGGGGTGACCAACATGGCATGTCTCTCAATGACAGCAAATCTAGGCTTCGTGCATCAACTTCTCTGCGCACTGAAATTGCCACCGCATGCCAGTTTTTTGAGTTCCTTCCTCTGAAAGACTGA 870 0.4483 MSDSFSAFKLHHPHSTPNSTLNSAAPPKITPFCICIHCTNVISLNYPLGDEGASTTTSRGLHGQSQQSSRWSPTPAQLLKLEELYRQGTKTPTAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRREMEQAASDSAQDKQLYVVNVRSSEEKQDPAGLRGTGYQVKETKKFASSPNWSALRQEIAEKRTQVLKKPEQTTPLSQKFTSQNHNLPFILNRENYCTYCDEEEYSNTRTLELFPLKRGDQHGMSLNDSKSRLRASTSLRTEIATACQFFEFLPLKD 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0181 289 Gene3D - 61 134 - -
Lele56g0181 289 MobiDBLite consensus disorder prediction 52 73 - -
Lele56g0181 289 SUPERFAMILY Homeodomain-like 62 132 IPR009057 -
Lele56g0181 289 SMART HOX_1 66 133 IPR001356 GO:0003677
Lele56g0181 289 MobiDBLite consensus disorder prediction 1 23 - -
Lele56g0181 289 ProSiteProfiles 'Homeobox' domain profile. 64 129 IPR001356 GO:0003677
Lele56g0181 289 Pfam Homeodomain 68 128 IPR001356 GO:0003677
Lele56g0181 289 CDD homeodomain 70 124 IPR001356 GO:0003677
Lele56g0181 289 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 58 284 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0181 Lele-ChrLele56 1562139 1564474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0181 68 181 Wox Gene Family AT3G18010 57.895 9.19e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele56g0181 Homeodomain 6.2e-19 CL0123