Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0174 ATGGATAACGTTCTGGGTCTTCTCAAACTTAGTATCAAGAGAGGTATTTCTCTCGCAATTCGTGATACTCGCAGCAGTGACCCTTATGTTGTTGTCTCCTTGGGCGACCAGAAAGTGAAGACTCGTGTCGTGAAGAACAACCGCAACCCTCAGTGGGATGATGAATTGACACTCGCTGTTAAGGATATCAACTCTCCAATTCATCTTGAAGTTTTTGACCAAGACACATTCACCTTGGATGACAAAATGGGGGATGCAGAAATAGATATAAAGCCATATCTTGAGTGTCTGAAGATGAACTTGGCCAACCTCCCAAATGGTTGTGTGGTGAAGAGAGTTCAACCGGATGGGAAAAACTACCTTGCTGATGGGAGCAGCTGCATATGGAATAACGGAAAAATCACACAAGAAATGACTCTTGCGTTGAGAAATGTCGAATGTGGCTATGTAGTTGTCGAAATCGAGTGGAAGGAAGTTCCAGGCTGCAAGGGCCTATCTGGGATTGAGGAAGTTTTTGACCAAGACACATTCACCATGGATGACAAAATGGGGGATGCAGAAATAGACATAAAGCCATATCTTGAGTGTCTGAACAACTTGGCCAACCTCCCAAATGGTTGTGTAGTGAAGAGAGTTCAACCAGATGGGAAAAACTACCTTGCTGATGAGAGCAACTGCATCTGGAATAACGGAAAAATTATCAGTTTATATAATGATCTGTGCTAG 726 0.4325 MDNVLGLLKLSIKRGISLAIRDTRSSDPYVVVSLGDQKVKTRVVKNNRNPQWDDELTLAVKDINSPIHLEVFDQDTFTLDDKMGDAEIDIKPYLECLKMNLANLPNGCVVKRVQPDGKNYLADGSSCIWNNGKITQEMTLALRNVECGYVVVEIEWKEVPGCKGLSGIEEVFDQDTFTMDDKMGDAEIDIKPYLECLNNLANLPNGCVVKRVQPDGKNYLADESNCIWNNGKIISLYNDLC 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0174 241 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Lele56g0174 241 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lele56g0174 241 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 170 234 IPR044562 -
Lele56g0174 241 SMART C2_3c 7 102 IPR000008 -
Lele56g0174 241 Pfam C2 domain 7 92 IPR000008 -
Lele56g0174 241 Gene3D C2 domain 3 163 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0174 Lele-ChrLele56 1531755 1535055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0174 171 235 C2H2 Transcription Factor Family AT1G70790 52.941 4.94e-19 79.0