Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0161 ATGATGATGAGTGAATCAAGGTGTGCGAAGGCTAATGAGGAAAAGCCAACCTGTCAAATTGTATTTTGTGAGGGGAAATGGCCTGGCTGGCTGGAGGGATCCAACAAAAGGTTGCTGTGCCAGATTTCATTTGTTGTCTCCCTACGTTACAAATTATCTTCTTCCATCGTATCCAATTTTCACTTTCTCTGCTCCAATTCTCATTTTCCCTCGGCTAATCAAATTTCAGAGTGCACGGGGAAGTTGGACGATGGAAGAGAGGTTGCGGTGAAGAAGTTATCACAAAGCTCAAATCAAGGGAACAAAGAGTTCATGAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCACCGGAATGCGGTGAATTTGTTGGGTTATTGTGCCCATGGCACAGAGCAGCTACTTGTGTACGAGTATGTTCCTCATGAGAGCCTGGACAAACTTTTATTCAGTAAGGCATACAAGCTTTACAAGAAAGAGCGGAGCTTAGAAATGGTTGACCCTGCATTAGCAGATTCAGCAATAGCAGATCAAATAGCAATGTGCATACAACTGAGTCTGCTATGCGTTCAAGGGGATCCACAGCTCCGGCCAAGCATGCGGCGGGTGGTGGTTATGCAGTCGAAGAAGCCGGGCCACATGGATGAGCCGACTAGACCAGGAGCGCCTGGTTCCAGATACAGAAGACCTTGCAGGCCTTCTGCATTTTCTTCCGCAGCTGGTACTTCCGGTGCTGGGTCTGATTCTCGGACTTCAGACTCAAGCAGTAACTACGCTGCCACCGCAACAACACCTGGAACAAGCTCCGCCGCTCGAGAAATTGACCATTGCGGAAAACGTCCCATGCAGGAGGCTTAG 855 0.4865 MMMSESRCAKANEEKPTCQIVFCEGKWPGWLEGSNKRLLCQISFVVSLRYKLSSSIVSNFHFLCSNSHFPSANQISECTGKLDDGREVAVKKLSQSSNQGNKEFMNEAKLLARVQHRNAVNLLGYCAHGTEQLLVYEYVPHESLDKLLFSKAYKLYKKERSLEMVDPALADSAIADQIAMCIQLSLLCVQGDPQLRPSMRRVVVMQSKKPGHMDEPTRPGAPGSRYRRPCRPSAFSSAAGTSGAGSDSRTSDSSSNYAATATTPGTSSAAREIDHCGKRPMQEA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0161 284 Gene3D Transferase(Phosphotransferase) domain 1 135 216 - -
Lele56g0161 284 SUPERFAMILY Protein kinase-like (PK-like) 81 154 IPR011009 -
Lele56g0161 284 Pfam Protein tyrosine and serine/threonine kinase 83 160 IPR001245 GO:0004672|GO:0006468
Lele56g0161 284 Gene3D Phosphorylase Kinase; domain 1 62 134 - -
Lele56g0161 284 MobiDBLite consensus disorder prediction 235 269 - -
Lele56g0161 284 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 148 258 - -
Lele56g0161 284 SMART tyrkin_6 69 206 IPR020635 GO:0004713|GO:0006468
Lele56g0161 284 MobiDBLite consensus disorder prediction 206 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0161 Lele-ChrLele56 1443505 1448801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0161 148 219 Receptor kinase-like Gene Family AT4G38830 36.486 4.09e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele56g0161 PK_Tyr_Ser-Thr 3.7e-13 CL0016