Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0156 ATGACTACCCAACGCCTCCTCCTCCTCCTCCTCTCATCCACATTCTTCTTCCTCCACCCATCCACCGCCGTCGGTGAATCCTACTTCATCGCCCCCACCGAGTCTTCCCCCAACTCCTCCGATTTCATCCGCACGAGCTGCGGCACCACTCTGTACCCTGACATCTGCTACATCTCCCTCTCTCGCTACGCCAATGCCGTCCAGCAAAATCCTGGCCAGCTCGCTCGCGTCGCCATCGCCGTCAGCCTCTCCAAGGCTCACCGGATGGCCTCCTACATCTCCAACCTCACTCGCGACACCGACTACGAAGCCAACTTGCGCGCCGCCTCCGCCCTCCATGACTGCTTCAGCAACGTCGGAGACGCCGTTGACGAAATCCGCGGCTCCCTCAAGCAGATGCGCCAGATTGGGGCCGCTGGCTCCGGCGAGGAGTCGTTCAGGTTCCAGATGAGTAACGTGCAGACGTGGATGAGCGCGGCGCTGACGGACGAGGAGACGTGTACGGACGGCTTCGAGGACGTGGCGGACAATCCGTTGAAGGCGGATGTGTGCGATAAGGTCACGGACTTGAAGAAATTCACCAGCAACGCCTTGGCGCTGGTAAATAATTACGCCAACACGGGAACGCCTTGA 633 0.6019 MTTQRLLLLLLSSTFFFLHPSTAVGESYFIAPTESSPNSSDFIRTSCGTTLYPDICYISLSRYANAVQQNPGQLARVAIAVSLSKAHRMASYISNLTRDTDYEANLRAASALHDCFSNVGDAVDEIRGSLKQMRQIGAAGSGEESFRFQMSNVQTWMSAALTDEETCTDGFEDVADNPLKADVCDKVTDLKKFTSNALALVNNYANTGTP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0156 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 204 IPR035513 -
Lele56g0156 210 CDD PMEI-like_3 45 206 - -
Lele56g0156 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 204 IPR035513 -
Lele56g0156 210 Pfam Plant invertase/pectin methylesterase inhibitor 41 200 IPR006501 GO:0004857
Lele56g0156 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 200 - -
Lele56g0156 210 FunFam Pectin methylesterase inhibitor 1 38 204 - -
Lele56g0156 210 SMART PMEI_2 38 200 IPR006501 GO:0004857
Lele56g0156 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0156 Lele-ChrLele56 1419982 1420614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0156 43 200 Carbohydrate Esterase AT5G53370 30.000 1.13e-14 70.1